Evidence map›Paper›PMID 28924191›Full record

ArticleNature microbiology2017

Metabolic crosstalk regulates Porphyromonas gingivalis colonization and virulence during oral polymicrobial infection.

Masae Kuboniwa, John R Houser, Erik L Hendrickson, Qian Wang, Samar A Alghamdi, Akito Sakanaka, Daniel P Miller, Justin A Hutcherson, Tiansong Wang, David A C Beck and 6 more

Open access · greenAbstract read
In one paragraph

Article in Nature microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 93 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
93citing papers in PubMed, 1 pooled it
10.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

93 citing papers in PubMed, 1 synthesis or guideline pooled it, 139 citations in OpenAlex.

  1. Pooled it
  2. Trial
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  12. Microorganisms · 2026
    Article
  13. Review
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  15. Tyrosine phosphorylation coupling of one-carbon metabolism and virulence in an endogenous pathogen.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. The role of salivary metabolomics in chronic periodontitis: bridging oral and systemic diseases.Metabolomics : Official journal of the Metabolomic Society · 2025
    Review

33 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 2 countries.

Masae KuboniwaDepartment of Preventive Dentistry, Osaka University Graduate School of Dentistry, 1-8 Yamadaoka, Suita, Osaka, 565-0871, Japan.
John R HouserInstitute for Cellular and Molecular Biology, and Center for Systems and Synthetic Biology, The University of Texas at Austin, Austin, TX, 78712, USA.
Erik L HendricksonCenter for Microbial Proteomics and Chemical Engineering, University of Washington, Seattle, WA, 98195, USA.
Qian WangDepartment of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, 40292, USA.
Samar A AlghamdiDepartment of Preventive Dentistry, Osaka University Graduate School of Dentistry, 1-8 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Akito SakanakaDepartment of Preventive Dentistry, Osaka University Graduate School of Dentistry, 1-8 Yamadaoka, Suita, Osaka, 565-0871, Japan.ORCID http://orcid.org/0000-0001-9733-6886
Daniel P MillerDepartment of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, 40292, USA.
Justin A HutchersonDepartment of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, 40292, USA.
Tiansong WangCenter for Microbial Proteomics and Chemical Engineering, University of Washington, Seattle, WA, 98195, USA.
David A C BeckCenter for Microbial Proteomics and Chemical Engineering, University of Washington, Seattle, WA, 98195, USA.
Marvin WhiteleyDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX, 78712, USA.ORCID http://orcid.org/0000-0001-6590-4703
Atsuo AmanoDepartment of Preventive Dentistry, Osaka University Graduate School of Dentistry, 1-8 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Huizhi WangDepartment of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, 40292, USA.
Edward M MarcotteInstitute for Cellular and Molecular Biology, and Center for Systems and Synthetic Biology, The University of Texas at Austin, Austin, TX, 78712, USA.
Murray HackettCenter for Microbial Proteomics and Chemical Engineering, University of Washington, Seattle, WA, 98195, USA.
Richard J LamontDepartment of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, 40292, USA. rich.lamont@louisville.edu.ORCID http://orcid.org/0000-0002-3147-5039
University of Louisville · USUniversity of Washington · USThe University of Osaka · JPThe University of Texas at Austin · USJapan Agency for Medical Research and Development · JP

Funding

MOLECULAR ASPECTS OF ORAL PLAQUE FORMATIONR01DE012505 · NIDCR · UNIVERSITY OF WASHINGTON · PI Richard J Lamont, JAN S POTEMPA · 1998 to 2026
$9.5M
Proteomics and model organism humanization to decode human geneticsR35GM122480 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI EDWARD M MARCOTTE · 2017 to 2026
$5.4M
P GINGIVALIS INTERACTIONS WITH GINGIVAL EPITHELIAL CELLSR01DE011111 · NIDCR · UNIVERSITY OF WASHINGTON · PI HARIBABU BODDULURI, Richard J Lamont · 1995 to 2026
$5.4M
Probing Polymicrobial Synergy Using hihg Throughout GenomicsR01DE023193 · NIDCR · UNIVERSITY OF TEXAS AT AUSTIN · PI LAMONT, RICHARD J, WHITELEY, MARVIN · 2013 to 2023
$4.7M
Next-Generation Proteomics: Massively Parallel Single-Molecule Protein IdentificaDP1GM106408 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI MARCOTTE, EDWARD M · 2012 to 2016
$3.8M
Proteomics of Porphyromonas gingivalis interactions with Fusobacterium nucleatumR01DE014372 · NIDCR · UNIVERSITY OF WASHINGTON · PI HACKETT, MURRAY · 2003 to 2014
$3.7M
P.gingivalis Interactions with Gingival Epithelial CellsR37DE011111 · NIDCR · UNIVERSITY OF LOUISVILLE · PI LAMONT, RICHARD J · 2009 to 2018
$3.6M
Proteomics of P. gingivalis interactions with F. nucleatum and S. gordoniiR56DE014372 · NIDCR · UNIVERSITY OF WASHINGTON · PI HACKETT, MURRAY · 2009 to 2015
$1.2M
NIDCR NIH HHS R01 DE011111NIDCR NIH HHS R01 DE012505NIDCR NIH HHS R01 DE014372NIDCR NIH HHS R01 DE023193NIDCR NIH HHS R37 DE011111NIDCR NIH HHS R56 DE014372NIGMS NIH HHS DP1 GM106408NIGMS NIH HHS R35 GM122480
6 · The paper itself

Abstract

Many human infections are polymicrobial in origin, and interactions among community inhabitants shape colonization patterns and pathogenic potential

Indexed as

Microbial Interactions4-Aminobenzoic AcidAdhesins, BacterialAnimalsBacterial AdhesionBacteroidaceae InfectionsBiofilmsCoinfectionDisease Models, AnimalDysbiosisFemaleHumansMetabolomicsMiceMice, Inbred BALB Cpara-Aminobenzoates4-Aminobenzoic AcidAdhesins, Bacterialpara-Aminobenzoates

Identifiers

PMID28924191
PMCPMC5678995
OpenAlexW2754851756

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.