Evidence map›Paper›PMID 28924186›Full record

ArticleMolecular psychiatry2018

Interactome analysis reveals ZNF804A, a schizophrenia risk gene, as a novel component of protein translational machinery critical for embryonic neurodevelopment.

Y Zhou, F Dong, T A Lanz, V Reinhart, M Li, L Liu, J Zou, H S Xi, Y Mao

Open access · hybridAbstract read
In one paragraph

Article in Molecular psychiatry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 55 citations in OpenAlex.

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  8. Polymorphism in the ZNF804A Gene and Variation in DBiological psychiatry. Cognitive neuroscience and neuroimaging · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Y ZhouDepartment of Biology, Pennsylvania State University, University Park, PA, USA.
F DongDepartment of Biology, Pennsylvania State University, University Park, PA, USA.ORCID 0000-0001-5688-4165
T A LanzDepartment of Internal Medicine, Pfizer, Cambridge, MA, USA.
V ReinhartDepartment of Internal Medicine, Pfizer, Cambridge, MA, USA.
M LiDepartment of Biology, Pennsylvania State University, University Park, PA, USA.
L LiuDepartment of Biology, Pennsylvania State University, University Park, PA, USA.
J ZouiPSC Core, Center for Molecular Medicine, National Heart, Lung, and Blood Institute, NIH Bethesda, MD, USA.
H S XiDepartment of Internal Medicine, Pfizer, Cambridge, MA, USA.
Y MaoDepartment of Biology, Pennsylvania State University, University Park, PA, USA.ORCID 0000-0001-7339-1565
Pennsylvania State University · USPfizer (United States) · USNational Heart Lung and Blood Institute · US

Funding

Dissecting functional roles of schizophrenia risk gene ZNF804a in neural developmentR21MH108983 · NIMH · PENNSYLVANIA STATE UNIVERSITY, THE · PI MAO, YINGWEI · 2016 to 2017
$406k
NIMH NIH HHS R21 MH108983
6 · The paper itself

Abstract

Recent genome-wide association studies identified over 100 genetic loci that significantly associate with schizophrenia (SZ). A top candidate gene, ZNF804A, was robustly replicated in different populations. However, its neural functions are largely unknown. Here we show in mouse that ZFP804A, the homolog of ZNF804A, is required for normal progenitor proliferation and neuronal migration. Using a yeast two-hybrid genome-wide screen, we identified novel interacting proteins of ZNF804A. Rather than transcriptional factors, genes involved in mRNA translation are highly represented in our interactome result. ZNF804A co-fractionates with translational machinery and modulates the translational efficiency as well as the mTOR pathway. The ribosomal protein RPSA interacts with ZNF804A and rescues the migration and translational defects caused by ZNF804A knockdown. RNA immunoprecipitation-RNAseq (RIP-Seq) identified transcripts bound to ZFP804A. Consistently, ZFP804A associates with many short transcripts involved in translational and mitochondrial regulation. Moreover, among the transcripts associated with ZFP804A, a SZ risk gene, neurogranin (NRGN), is one of ZFP804A targets. Interestingly, downregulation of ZFP804A decreases NRGN expression and overexpression of NRGN can ameliorate ZFP804A-mediated migration defect. To verify the downstream targets of ZNF804A, a Duolink in situ interaction assay confirmed genes from our RIP-Seq data as the ZNF804A targets. Thus, our work uncovered a novel mechanistic link of a SZ risk gene to neurodevelopment and translational control. The interactome-driven approach here is an effective way for translating genome-wide association findings into novel biological insights of human diseases.

Indexed as

AnimalsCell LineCell MovementCentral Nervous SystemFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansKruppel-Like Transcription FactorsMaleMiceMice, Inbred C57BLNeurograninNeuronsPolymorphism, Single NucleotideProtein BiosynthesisKruppel-Like Transcription FactorsNeurograninZNF804A protein, human

Identifiers

PMID28924186
PMCPMC5868632
OpenAlexW2754238364

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.