Evidence map›Paper›PMID 28924017›Full record

ArticlePlant physiology2018

In Silico Analysis of the Regulation of the Photosynthetic Electron Transport Chain in C3 Plants.

Alejandro Morales, Xinyou Yin, Jeremy Harbinson, Steven M Driever, Jaap Molenaar, David M Kramer, Paul C Struik

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 56 citations in OpenAlex.

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  13. The role of Cytochrome bPhotosynthesis research · 2021
    Article
  14. Review
  15. Photosynthetic Linear Electron Flow Drives COInternational journal of molecular sciences · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Alejandro MoralesCentre for Crop Systems Analysis, Wageningen University, 6700 AK, Wageningen, The Netherlands alejandro.moralessierra@wur.nl.ORCID 0000-0002-6129-4570
Xinyou YinCentre for Crop Systems Analysis, Wageningen University, 6700 AK, Wageningen, The Netherlands.ORCID 0000-0001-8273-8022
Jeremy HarbinsonHorticulture and Product Physiology, Wageningen University, 6700 AA, Wageningen, The Netherlands.ORCID 0000-0002-0607-4508
Steven M DrieverCentre for Crop Systems Analysis, Wageningen University, 6700 AK, Wageningen, The Netherlands.ORCID 0000-0003-4144-6028
Jaap MolenaarBiometris, Mathematical and Statistical Methods Group, Wageningen University, 6700 AA, Wageningen, The Netherlands.ORCID 0000-0001-6011-7487
David M KramerDepartment of Energy Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48823.
Paul C StruikCentre for Crop Systems Analysis, Wageningen University, 6700 AK, Wageningen, The Netherlands.ORCID 0000-0003-2196-547X
Wageningen University & Research · NLMichigan State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present a new simulation model of the reactions in the photosynthetic electron transport chain of C3 species. We show that including recent insights about the regulation of the thylakoid proton motive force, ATP/NADPH balancing mechanisms (cyclic and noncyclic alternative electron transport), and regulation of Rubisco activity leads to emergent behaviors that may affect the operation and regulation of photosynthesis under different dynamic environmental conditions. The model was parameterized with experimental results in the literature, with a focus on Arabidopsis (

Indexed as

Models, BiologicalAdenosine DiphosphateAdenosine TriphosphateArabidopsisCarbon DioxideComputer SimulationElectron TransportFerredoxinsFluorescenceHydrogen-Ion ConcentrationLightNADPPhotosynthesisPlantsPlastoquinoneAdenosine DiphosphateAdenosine TriphosphateCarbon DioxideFerredoxinsNADPplastoquinolPlastoquinone

Identifiers

PMID28924017
PMCPMC5813522
OpenAlexW2754023947

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.