ArticleBMC genomics2017
Mitochondrial genomes reveal recombination in the presumed asexual Fusarium oxysporum species complex.
Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.
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Who cites it
47 citing papers in PubMed, 127 citations in OpenAlex.
- Reassessment of Species Boundaries in the Fusarium oxysporum Species Complex: Insights from Korean Isolates Using Multilocus Phylogenetics, GCPSR, and Coalescent-Based Approaches.The plant pathology journal · 2026Article
- Phylogenetic Diversity of Fusarium Species Complexes Causing Wilt in Watermelon and Melon in Korea.The plant pathology journal · 2026Article
- Insights into the Phylogeny ofJournal of fungi (Basel, Switzerland) · 2026Article
- Integrated metabolomics and metagenomics uncover pathogenic mechanisms of Fusarium wilt and faba bean defense responses.NPJ science of food · 2026Article
- Host-specific adaptation inmBio · 2025Article
- From Morphology to Multi-Omics: A New Age of Fusarium Research.Pathogens (Basel, Switzerland) · 2025Review
- Long-Read Draft Genome Sequences of TwoJournal of fungi (Basel, Switzerland) · 2025Article
- Virulence ofbioRxiv : the preprint server for biology · 2025Article
- Frequent genetic exchanges revealed by a pan-mitogenome graph of a fungal plant pathogen.mBio · 2024Article
- Molecular phylogeny and genetic diversity of Fusarium oxysporum from various hosts in Malaysia.Scientific reports · 2024Article
- The complete mitochondrial genome of the banana pathogenMicrobiology resource announcements · 2024Article
- Comparative Analysis of the Mitochondrial Genome Sequences ofJournal of fungi (Basel, Switzerland) · 2024Article
- The complete mitochondrial genomes of five critical phytopathogenic Bipolaris species: features, evolution, and phylogeny.IMA fungus · 2024Article
- Comparative Mitogenomics Analysis Revealed Evolutionary Divergence amongInternational journal of molecular sciences · 2024Article
- Population genomics reveals meiotic recombination inProceedings of the National Academy of Sciences of the United States of America · 2023Article
- Group I Intron as a Potential Target for Antifungal Compounds: Development of aMolecules (Basel, Switzerland) · 2023Article
- Single-molecule Sequencing of an Animal Mitochondrial Genome Reveals Chloroplast-like Architecture and Repeat-mediated Recombination.Molecular biology and evolution · 2023Article
- EndophyticFrontiers in microbiology · 2023Article
- Article
- Multi-site fungicides suppress banana Panama disease, caused by Fusarium oxysporum f. sp. cubense Tropical Race 4.PLoS pathogens · 2022Article
Corrections and comments
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Authors and funding
7 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundThe Fusarium oxysporum species complex (FOSC) contains several phylogenetic lineages. Phylogenetic studies identified two to three major clades within the FOSC. The mitochondrial sequences are highly informative phylogenetic markers, but have been mostly neglected due to technical difficulties.
resultsA total of 61 complete mitogenomes of FOSC strains were de novo assembled and annotated. Length variations and intron patterns support the separation of three phylogenetic species. The variable region of the mitogenome that is typical for the genus Fusarium shows two new variants in the FOSC. The variant typical for Fusarium is found in members of all three clades, while variant 2 is found in clades 2 and 3 and variant 3 only in clade 2. The extended set of loci analyzed using a new implementation of the genealogical concordance species recognition method support the identification of three phylogenetic species within the FOSC. Comparative analysis of the mitogenomes in the FOSC revealed ongoing mitochondrial recombination within, but not between phylogenetic species.
conclusionsThe recombination indicates the presence of a parasexual cycle in F. oxysporum. The obstacles hindering the usage of the mitogenomes are resolved by using next generation sequencing and selective genome assemblers, such as GRAbB. Complete mitogenome sequences offer a stable basis and reference point for phylogenetic and population genetic studies.
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