ArticleMicrobial ecology2018
Distinctive Patterns in the Taxonomical Resolution of Bacterioplankton in the Sediment and Pore Waters of Contrasted Freshwater Lakes.
Article in Microbial ecology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
18 citing papers in PubMed.
- Structure and community assembly of rare bacterial community in sediments of Sancha Lake.Scientific reports · 2025Article
- Seasonal and stable heterotrophic guilds drive Arctic benthic microbiome functioning across polar day and night.ISME communications · 2025Article
- Characteristics ofJournal of fungi (Basel, Switzerland) · 2024Article
- Sterile Diet Causes Gut Microbiome Collapse of Cancer Patients Post Hematopoietic Cell Transplantation, But Normal Diet Recovers Them.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024Article
- Niche separation in bacterial communities and activities in porewater, loosely attached, and firmly attached fractions in permeable surface sediments.The ISME journal · 2024Article
- Nutrient structure dynamics and microbial communities at the water-sediment interface in an extremely acidic lake in northern Patagonia.Frontiers in microbiology · 2024Article
- Antibiotics affected the bacterial community structure and diversity in pore water and sediments with cultivatedFrontiers in microbiology · 2023Article
- Bacterial community compositions and nitrogen metabolism function in a cattle farm wastewater treatment plant revealed by Illumina high-throughput sequencing.Environmental science and pollution research international · 2021Article
- Different nutrient levels, rather than seasonal changes, significantly affected the spatiotemporal dynamic changes of ammonia-oxidizing microorganisms in Lake Taihu.World journal of microbiology & biotechnology · 2021Article
- Article
- Sediment Bacterial Community Structure Under the Influence of Different Domestic Sewage Types.Journal of microbiology and biotechnology · 2020Article
- A meta-taxonomic investigation of the prokaryotic diversity of water bodies impacted by acid mine drainage from the São Domingos mine in southern Portugal.Extremophiles : life under extreme conditions · 2019Article
- Changes in microbial communities during the removal of natural and synthetic glucocorticoids in three types of river-based aquifer media.Environmental science and pollution research international · 2019Article
- Changes of Bacterial Communities in Response to Prolonged Hydrodynamic Disturbances in the Eutrophic Water-Sediment Systems.International journal of environmental research and public health · 2019Article
- Effects of hydrodynamic disturbances on biodegradation of tetrabromobisphenol A in water-sediment systems.Environmental science and pollution research international · 2019Article
- Article
- Microbial Community Structure in the Sediments and Its Relation to Environmental Factors in Eutrophicated Sancha Lake.International journal of environmental research and public health · 2019Article
- High-throughput analysis of the effects of different fish culture methods on antibiotic resistance gene abundances in a lake.Environmental science and pollution research international · 2019Article
Corrections and comments
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Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Bacteria assemblages in lake sediments play a key role in various biogeochemical processes, yet their association with interstitial pore waters has been scarcely investigated. In this study, we utilized Illumina next-generation amplicon sequencing of the 16S rRNA gene to characterize the seasonal bacterial communities in the sediments and pore waters of three contrasted temperate freshwater lakes, namely Pavin, Aydat, and Grangent (French Massif Central). Despite occupying seemingly similar habitats, bacterial communities differed substantially between sediments and pore waters at all seasons with low sharing of operational taxonomic units (OTUs, 6.7 to 20.3%) between them. Sediment-associated bacteria were more rich and diverse than pore water bacteria, indicating a high heterogeneity in the sediment microhabitat. The changes in both sediment and pore water bacterial communities were lake and season specific. The bacterial community showed distinct differences between the lakes, with larger presence of strict anaerobes such as Syntrophus, Syntrophorhabdus, and Sulfuricurvum in the pore water and sediments of Pavin responsible for carbon and sulfur cycling. In both Aydat and Grangent, the hgcI_clade dominated throughout the study period in the pore waters. The higher representation of lesser-known transient members of lake communities such as Methylotenera in the pore waters of Aydat, and Clostridium and Sulfuricurvum in the pore and sediments of Grangent, respectively, were observed during the period of temporary anoxia in summer caused by lake stratification. Our study revealed that in the investigated lakes, the prevailing environmental factors across time and space structured and influenced the adaptation of bacterial communities to specific ecological niches.
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