Evidence map›Paper›PMID 28919854›Full record

ArticleFrontiers in neuroinformatics2017

PRANAS: A New Platform for Retinal Analysis and Simulation.

Bruno Cessac, Pierre Kornprobst, Selim Kraria, Hassan Nasser, Daniela Pamplona, Geoffrey Portelli, Thierry Viéville

Abstract read
In one paragraph

Article in Frontiers in neuroinformatics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. A dynamical model for generating synthetic data to quantify active tactile sensing behavior in the rat.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  3. Article
  4. Review
  5. Article
  6. Geppetto: a reusable modular open platform for exploring neuroscience data and models.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Bruno CessacBiovision Team, Inria, Université Côte d'AzurSophia Antipolis, France.
Pierre KornprobstBiovision Team, Inria, Université Côte d'AzurSophia Antipolis, France.
Selim KrariaBiovision Team, Inria, Université Côte d'AzurSophia Antipolis, France.
Hassan NasserBiovision Team, Inria, Université Côte d'AzurSophia Antipolis, France.
Daniela PamplonaBiovision Team, Inria, Université Côte d'AzurSophia Antipolis, France.
Geoffrey PortelliBiovision Team, Inria, Université Côte d'AzurSophia Antipolis, France.
Thierry ViévilleInria, Mnemosyne Project TeamBordeaux, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The retina encodes visual scenes by trains of action potentials that are sent to the brain via the optic nerve. In this paper, we describe a new free access user-end software allowing to better understand this coding. It is called PRANAS (https://pranas.inria.fr), standing for Platform for Retinal ANalysis And Simulation. PRANAS targets neuroscientists and modelers by providing a unique set of retina-related tools. PRANAS integrates a retina simulator allowing large scale simulations while keeping a strong biological plausibility and a toolbox for the analysis of spike train population statistics. The statistical method (entropy maximization under constraints) takes into account both spatial and temporal correlations as constraints, allowing to analyze the effects of memory on statistics. PRANAS also integrates a tool computing and representing in 3D (time-space) receptive fields. All these tools are accessible through a friendly graphical user interface. The most CPU-costly of them have been implemented to run in parallel.

Indexed as

Gibbs distributionslarge scale spiking activitymaximum entropymulti-electrode array recordingspopulation codingretina simulatorspike train generationspike train statistics

Identifiers

PMID28919854
PMCPMC5585572

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.