Evidence map›Paper›PMID 28919263›Full record

ArticleStem cell reports2017

Single-Cell Gene Expression Analysis of a Human ESC Model of Pancreatic Endocrine Development Reveals Different Paths to β-Cell Differentiation.

Maja Borup Kjær Petersen, Ajuna Azad, Camilla Ingvorsen, Katja Hess, Mattias Hansson, Anne Grapin-Botton, Christian Honoré

Abstract read
In one paragraph

Article in Stem cell reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  17. Single-cell transcriptome and accessible chromatin dynamics during endocrine pancreas development.Proceedings of the National Academy of Sciences of the United States of America · 2022
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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Maja Borup Kjær PetersenDepartment of Stem Cell Biology, Novo Nordisk A/S, Novo Nordisk Park, 2760 Måløv, Denmark; DanStem, University of Copenhagen, 3B Blegdamsvej, 2200 Copenhagen N, Denmark.
Ajuna AzadDanStem, University of Copenhagen, 3B Blegdamsvej, 2200 Copenhagen N, Denmark.
Camilla IngvorsenHistology and Imaging, Novo Nordisk A/S, Novo Nordisk Park, 2760 Måløv, Denmark.
Katja HessDanStem, University of Copenhagen, 3B Blegdamsvej, 2200 Copenhagen N, Denmark.
Mattias HanssonGlobal Research External Affairs, Novo Nordisk A/S, Novo Nordisk Park, 2760 Måløv, Denmark.
Anne Grapin-BottonDanStem, University of Copenhagen, 3B Blegdamsvej, 2200 Copenhagen N, Denmark. Electronic address: anne.grapin-botton@sund.ku.dk.
Christian HonoréDepartment of Stem Cell Biology, Novo Nordisk A/S, Novo Nordisk Park, 2760 Måløv, Denmark. Electronic address: clfh@novonordisk.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The production of insulin-producing β cells from human embryonic stem cells (hESCs) in vitro represents a promising strategy for a cell-based therapy for type 1 diabetes mellitus. To explore the cellular heterogeneity and temporal progression of endocrine progenitors and their progeny, we performed single-cell qPCR on more than 500 cells across several stages of in vitro differentiation of hESCs and compared them with human islets. We reveal distinct subpopulations along the endocrine differentiation path and an early lineage bifurcation toward either polyhormonal cells or β-like cells. We uncover several similarities and differences with mouse development and reveal that cells can take multiple paths to the same differentiation state, a principle that could be relevant to other systems. Notably, activation of the key β-cell transcription factor NKX6.1 can be initiated before or after endocrine commitment. The single-cell temporal resolution we provide can be used to improve the production of functional β cells.

Indexed as

Gene Expression ProfilingSingle-Cell AnalysisBasic Helix-Loop-Helix ProteinsBiomarkersCell DifferentiationCell LineageComputational BiologyEmbryonic Stem CellsGene Expression Regulation, DevelopmentalGenes, ReporterHomeodomain ProteinsHumansImmunophenotypingInsulin-Secreting CellsModels, BiologicalNerve Tissue ProteinsBasic Helix-Loop-Helix ProteinsBiomarkersHomeodomain ProteinsNerve Tissue ProteinsNEUROG3 protein, humanNKX6-1 protein, humandifferentiationendocrinehormonelineageNEUROG3pancreaspluripotent stem cellsprogenitor

Identifiers

PMID28919263
PMCPMC5639261

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.