Evidence map›Paper›PMID 28916354›Full record

ArticleInternational journal of cardiology2017

Abnormal sodium channel mRNA splicing in hypertrophic cardiomyopathy.

Adam M Noyes, Anyu Zhou, Ge Gao, Lianzhi Gu, Sharlene Day, J Andrew Wasserstrom, Samuel C Dudley

Abstract read
In one paragraph

Article in International journal of cardiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. A Heart Failure-AssociatedFrontiers in physiology · 2021
    Article
  7. Article
  8. Review
  9. Review
  10. Review
  11. Angiotensin II Influences Pre-mRNA Splicing Regulation by EnhancingInternational journal of molecular sciences · 2019
    Article
  12. Article
  13. Alternative splicing in cardiomyopathy.Biophysical reviews · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Adam M NoyesDepartment of Cardiology, Warren Alpert School of Medicine at Brown University, Providence, RI, United States.
Anyu ZhouDepartment of Cardiology, Warren Alpert School of Medicine at Brown University, Providence, RI, United States.
Ge GaoCardiology Section, University of Illinois at Chicago, Chicago, IL, United States.
Lianzhi GuCardiology Section, University of Illinois at Chicago, Chicago, IL, United States.
Sharlene DayDepartment of Internal Medicine, University of Michigan Medical Center, Ann Arbor, MI, United States.
J Andrew WasserstromFeinberg Cardiovascular Research Institute, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States.
Samuel C DudleyDepartment of Cardiology, Warren Alpert School of Medicine at Brown University, Providence, RI, United States. Electronic address: samuel_dudley@brown.edu.
Brown University · USUniversity of Illinois Chicago · USNorthwestern University · USUniversity of Michigan–Ann Arbor · US

Funding

Na+ channel mRNA splicing in heart failureR01HL104025 · NHLBI · UNIVERSITY OF MINNESOTA · PI DUDLEY, SAMUEL C · 2011 to 2019
$3.3M
Atrial arrhythmias and Ca2+ waves in HF: simulation and experimental studiesR01HL119095 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SHIFERAW, YOHANNES, WASSERSTROM, JOHN ANDREW · 2014 to 2018
$3.0M
Metabolic Regulation of Sodium ChannelsR01HL106592 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI DUDLEY, SAMUEL C · 2011 to 2014
$1.6M
NHLBI NIH HHS R01 HL104025NHLBI NIH HHS R01 HL106592NHLBI NIH HHS R01 HL119095
6 · The paper itself

Abstract

backgroundOur previous studies showed that in ischemic and nonischemic heart failure (HF), the voltage-gated cardiac Na MATERIAL AND

methodsHuman heart tissue was obtained from HCM patients. The changes in relative abundances of SCN5A, its variants, splicing factors RBM25 and LUC7A, and PERK, a major effector of the UPR, were analyzed by real time RT-PCR and the expression changes were confirmed by Western Blot.

resultsWe found reduced full-length transcript, increased SCN5A truncation variants and activation of UPR in HCM when compared to control hearts. In these patients, real time RT-PCR revealed that HCM patients had decreased SCN5A mRNA to 27.8±4.07% of control (P<0.01) and an increased abundance of E28C and E28D (3.4±0.3 and 2.8±0.3-fold, respectively, P<0.05). PERK mRNA increased 8.2±3.1 fold (P<0.01) in HCM patients. Western blot confirmed a significant increase of PERK.

conclusionsThese data suggested that the full-length SCN5A was reduced in patients with HCM. This reduction was accompanied by abnormal SCN5A pre-mRNA splicing and UPR activation. These changes may contribute to the arrhythmic risk in HCM.

Indexed as

AdultAgedCardiomyopathy, HypertrophicFemaleHumansMaleMiddle AgedNAV1.5 Voltage-Gated Sodium ChannelRNA, MessengerRNA SplicingNAV1.5 Voltage-Gated Sodium ChannelRNA, MessengerSCN5A protein, humanHumanHypertrophic cardiomyopathyPerkSCN5ASodium channelsSplicing variantsSudden cardiac death

Identifiers

PMID28916354
PMCPMC5681396
OpenAlexW2753242367

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.