Evidence map›Paper›PMID 28914588›Full record

ArticleNucleus (Austin, Tex.)2017

Interstitial telomeric repeats-associated DNA breaks.

Olga Shubernetskaya, Dmitry Skvortsov, Sergey Evfratov, Maria Rubtsova, Elena Belova, Olga Strelkova, Varvara Cherepaninets, Oxana Zhironkina, Alexey Olovnikov, Maria Zvereva and 2 more

Abstract read
In one paragraph

Article in Nucleus (Austin, Tex.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Cytogenetically Elusive Sex Chromosomes in Scincoidean Lizards.International journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Olga Shubernetskayaa Chemistry Department , M.V. Lomonosov Moscow State University , Moscow , Russia.
Dmitry Skvortsova Chemistry Department , M.V. Lomonosov Moscow State University , Moscow , Russia.
Sergey Evfratova Chemistry Department , M.V. Lomonosov Moscow State University , Moscow , Russia.
Maria Rubtsovaa Chemistry Department , M.V. Lomonosov Moscow State University , Moscow , Russia.ORCID 0000-0002-4808-5416
Elena Belovaa Chemistry Department , M.V. Lomonosov Moscow State University , Moscow , Russia.
Olga Strelkovab A.N. Belozersky Institute of Physico-chemical Biology , M.V. Lomonosov Moscow State University , Moscow , Russia.
Varvara Cherepaninetsb A.N. Belozersky Institute of Physico-chemical Biology , M.V. Lomonosov Moscow State University , Moscow , Russia.
Oxana Zhironkinab A.N. Belozersky Institute of Physico-chemical Biology , M.V. Lomonosov Moscow State University , Moscow , Russia.ORCID 0000-0003-1124-8653
Alexey Olovnikovc Institute of Biochemical Physics, RAS , Moscow , Russia.
Maria Zverevaa Chemistry Department , M.V. Lomonosov Moscow State University , Moscow , Russia.
Olga Dontsovaa Chemistry Department , M.V. Lomonosov Moscow State University , Moscow , Russia.
Igor Kireevb A.N. Belozersky Institute of Physico-chemical Biology , M.V. Lomonosov Moscow State University , Moscow , Russia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During a cell's lifespan, DNA break formation is a common event, associated with many processes, from replication to apoptosis. Most of DNA breaks are readily repaired, but some are meant to persist in time, such as the chromosome ends, protected by telomeres. Besides them, eukaryotic genomes comprise shorter stretches of interstitial telomeric repeats. We assumed that the latter may also be associated with the formation of DNA breaks meant to persist in time. In zebrafish and mouse embryos, cells containing numerous breakage foci were identified. These breaks were not associated with apoptosis or replication, nor did they seem to activate DNA damage response machinery. Unlike short-living, accidental sparse breaks, the ones we found seem to be closely associated, forming discrete break foci. A PCR-based method was developed, allowing specific amplification of DNA regions located between inverted telomeric repeats associated with breaks. The cloning and sequencing of such DNA fragments were found to denote some specificity in their distribution for different tissue types and development stages.

Indexed as

DNA Breaks, Double-StrandedAnimalsApoptosisChromatinDNA FragmentationDNA RepairDNA ReplicationEmbryo, MammalianEmbryo, NonmammalianHistonesMiceOrgan SpecificityRepetitive Sequences, Nucleic AcidTelomereZebrafishChromatinHistonesChromatindevelopmentDNA breaksETUNELinterstitial telomeric repeatsmousezebrafish

Identifiers

PMID28914588
PMCPMC5788545

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.