Evidence map›Paper›PMID 28914580›Full record

ArticleRNA biology2018

IF2 and unique features of initiator tRNA

Bappaditya Roy, Qi Liu, Shinichiro Shoji, Kurt Fredrick

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Tuning tRNAs for improved translation.Frontiers in genetics · 2024
    Review
  5. Article
  6. Article
  7. The Structural Dynamics of Translation.Annual review of biochemistry · 2022
    Review
  8. Article
  9. Article
  10. Understanding the Genetic Code.Journal of bacteriology · 2019
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Bappaditya Roya Department of Microbiology and Center for RNA Biology , Ohio State University , Columbus , Ohio , USA.
Qi Liua Department of Microbiology and Center for RNA Biology , Ohio State University , Columbus , Ohio , USA.
Shinichiro Shojia Department of Microbiology and Center for RNA Biology , Ohio State University , Columbus , Ohio , USA.
Kurt Fredricka Department of Microbiology and Center for RNA Biology , Ohio State University , Columbus , Ohio , USA.
The Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Translation begins at AUG, GUG, or UUG codons in bacteria. Start codon recognition occurs in the P site, which may help explain this first-position degeneracy. However, the molecular basis of start codon specificity remains unclear. In this study, we measured the codon dependence of 30S•mRNA•tRNA

Indexed as

Peptide Chain Initiation, TranslationalReading FramesBase PairingBase SequenceBinding SitesCodon, InitiatorEscherichia coliKineticsMutationNucleic Acid ConformationProkaryotic Initiation Factor-2Ribosome Subunits, Large, BacterialRibosome Subunits, Small, BacterialRNA, MessengerRNA, Transfer, MetCodon, InitiatorProkaryotic Initiation Factor-2RNA, MessengerRNA, Transfer, MetIF1IF3initiationP siteribosomestart codon selection

Identifiers

PMID28914580
PMCPMC6103701
OpenAlexW2754001480

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.