Evidence map›Paper›PMID 28913593›Full record

ArticlePlanta2018

Interaction of Arabidopsis TGA3 and WRKY53 transcription factors on Cestrum yellow leaf curling virus (CmYLCV) promoter mediates salicylic acid-dependent gene expression in planta.

Shayan Sarkar, Abhimanyu Das, Prashant Khandagale, Indu B Maiti, Sudip Chattopadhyay, Nrisingha Dey

Abstract read
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In one paragraph

Article in Planta, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 38 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Shayan SarkarDepartment of Gene Function and Regulation, Institute of Life Sciences, Chandrasekharpur, Bhubaneswar, Odisha, India.
Abhimanyu DasDepartment of Gene Function and Regulation, Institute of Life Sciences, Chandrasekharpur, Bhubaneswar, Odisha, India.
Prashant KhandagaleDepartment of Gene Function and Regulation, Institute of Life Sciences, Chandrasekharpur, Bhubaneswar, Odisha, India.
Indu B MaitiKTRDC, College of Agriculture-Food and Environment, University of Kentucky, Lexington, KY, 40546, USA.
Sudip ChattopadhyayDepartment of Biotechnology, National Institute of Technology, Mahatma Gandhi Avenue, Durgapur, West Bengal, 713209, India. sudipchatto@gmail.com.
Nrisingha DeyDepartment of Gene Function and Regulation, Institute of Life Sciences, Chandrasekharpur, Bhubaneswar, Odisha, India. nrisinghad@gmail.com.
Institute of Life Sciences · INNational Institute of Technology Durgapur · INUniversity of Kentucky · US

Funding

Department of Biotechnology, Ministry of Science and Technology BT/HRD/35/01/05/2015 BT/PR12343/BPA118/33/2014
6 · The paper itself

Abstract

MAIN

conclusionThis paper highlighted a salicylic acid-inducible Caulimoviral promoter fragment from Cestrum yellow leaf curling virus (CmYLCV). Interaction of Arabidopsis transcription factors TGA3 and WRKY53 on CmYLCV promoter resulted in the enhancement of the promoter activity via NPR1-dependent salicylic acid signaling. Several transcriptional promoters isolated from plant-infecting Caulimoviruses are being presently used worldwide as efficient tools for plant gene expression. The CmYLCV promoter has been isolated from the Cestrum yellow leaf curling virus (Caulimoviruses) and characterized more than 12 years ago; also we have earlier reported a near-constitutive, pathogen-inducible CmYLCV promoter fragment (-329 to +137 from transcription start site; TSS) that enhances stronger (3×) expression than the previously reported fragments; all these fragments are highly efficient in monocot and dicot plants (Sahoo et al. Planta 240: 855-875, 2014). Here, we have shown that the full-length CmYLCV promoter fragment (-729 to +137 from TSS) is salicylic acid (SA) inducible. In this context, we have performed an in-depth study to elucidate the factors responsible for SA-inducibility of the CmYLCV promoter. We found that the as-1

Indexed as

Signal TransductionArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsCaulimovirusDNA-Binding ProteinsGene ExpressionGene Expression Regulation, PlantGenes, ReporterPlant LeavesPlants, Genetically ModifiedPromoter Regions, GeneticProtein Interaction MappingRecombinant ProteinsSalicylic AcidUp-RegulationArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsDNA-Binding ProteinsNPR1 protein, ArabidopsisRecombinant ProteinsSalicylic AcidTGA3 protein, ArabidopsisWRKY53 protein, ArabidopsisArabidopsisas-1Cestrum yellow leaf curling virus promoterNPR1Salicylic acidTGA3W-boxWRKY53

Identifiers

PMID28913593
OpenAlexW2755345688

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.