Evidence map›Paper›PMID 28913578›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2017

Loci on chromosomes 1A and 2A affect resistance to tan (yellow) spot in wheat populations not segregating for tsn1.

Manisha Shankar, Dorthe Jorgensen, Julian Taylor, Ken J Chalmers, Rebecca Fox, Grant J Hollaway, Stephen M Neate, Mark S McLean, Elysia Vassos, Hossein Golzar and 2 more

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Anther Culture Protocols for Barley and Wheat.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  2. An international wheat diversity panel reveals novel sources of genetic resistance to tan spot in Australia.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  3. Article
  4. Article
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  7. Genetic characterization of adult-plant resistance to tan spot (syn, yellow spot) in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  8. Article
  9. Meta-QTL analysis of tan spot resistance in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  10. Article
  11. Discovering new alleles for yellow spot resistance in the Vavilov wheat collection.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Manisha ShankarDepartment of Primary Industries and Regional Development (DPIRD), 3 Baron Hay Ct, South Perth, WA, 6151, Australia. manisha.shankar@agric.wa.gov.au.ORCID http://orcid.org/0000-0001-5217-4406
Dorthe JorgensenDepartment of Primary Industries and Regional Development (DPIRD), 3 Baron Hay Ct, South Perth, WA, 6151, Australia.
Julian TaylorSchool of Agriculture, Food and Wine, Waite Research Institute, University of Adelaide (UA), Glen Osmond, SA, 5064, Australia.
Ken J ChalmersSchool of Agriculture, Food and Wine, Waite Research Institute, University of Adelaide (UA), Glen Osmond, SA, 5064, Australia.
Rebecca FoxSchool of Agriculture, Food and Wine, Waite Research Institute, University of Adelaide (UA), Glen Osmond, SA, 5064, Australia.
Grant J HollawayAgriculture Victoria, Private Bag 260, Horsham, VIC, 3401, Australia.
Stephen M NeateCentre for Crop Health, University of Southern Queensland, Toowoomba, QLD, 4350, Australia.
Mark S McLeanAgriculture Victoria, Private Bag 260, Horsham, VIC, 3401, Australia.
Elysia VassosSchool of Agriculture, Food and Wine, Waite Research Institute, University of Adelaide (UA), Glen Osmond, SA, 5064, Australia.
Hossein GolzarDepartment of Primary Industries and Regional Development (DPIRD), 3 Baron Hay Ct, South Perth, WA, 6151, Australia.
Robert LoughmanDepartment of Primary Industries and Regional Development (DPIRD), 3 Baron Hay Ct, South Perth, WA, 6151, Australia.
Diane E MatherSchool of Agriculture, Food and Wine, Waite Research Institute, University of Adelaide (UA), Glen Osmond, SA, 5064, Australia.
The University of Adelaide · AUDepartment of Primary Industries and Regional Development · AUAgriculture Victoria · AUThe University of Western Australia · AUUniversity of Southern Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageQTL for tan spot resistance were mapped on wheat chromosomes 1A and 2A. Lines were developed with resistance alleles at these loci and at the tsn1 locus on chromosome 5B. These lines expressed significantly higher resistance than the parent with tsn1 only. Tan spot (syn. yellow spot and yellow leaf spot) caused by Pyrenophora tritici-repentis is an important foliar disease of wheat in Australia. Few resistance genes have been mapped in Australian germplasm and only one, known as tsn1 located on chromosome 5B, is known in Australian breeding programs. This gene confers insensitivity to the fungal effector ToxA. The main aim of this study was to map novel resistance loci in two populations: Calingiri/Wyalkatchem, which is fixed for the ToxA-insensitivity allele tsn1, and IGW2574/Annuello, which is fixed for the ToxA-sensitivity allele Tsn1. A second aim was to combine new loci with tsn1 to develop lines with improved resistance. Tan spot severity was evaluated at various growth stages and in multiple environments. Symptom severity traits exhibited quantitative variation. The most significant quantitative trait loci (QTL) were detected on chromosomes 2A and 1A. The QTL on 2A explained up to 29.2% of the genotypic variation in the Calingiri/Wyalkatchem population with the resistance allele contributed by Wyalkatchem. The QTL on 1A explained up to 28.1% of the genotypic variation in the IGW2574/Annuello population with the resistance allele contributed by Annuello. The resistance alleles at both QTL were successfully combined with tsn1 to develop lines that express significantly better resistance at both seedling and adult plant stages than Calingiri which has tsn1 only.

Indexed as

Quantitative Trait LociAllelesAscomycotaAustraliaChromosome MappingChromosomes, PlantDisease ResistanceLinear ModelsModels, GeneticPhenotypePlant DiseasesTriticum

Identifiers

PMID28913578
PMCPMC5668332
OpenAlexW2754286475

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.