Evidence map›Paper›PMID 28912548›Full record

ArticleScientific reports2017

Phylogenetic implications of nuclear rRNA IGS variation in Stipa L. (Poaceae).

Katarzyna Krawczyk, Marcin Nobis, Arkadiusz Nowak, Monika Szczecińska, Jakub Sawicki

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
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  7. Chromosomal dynamics inFrontiers in plant science · 2023
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  8. Elucidation of the evolutionary history ofFrontiers in plant science · 2023
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  11. The Ribosomal DNA Loci of the Ancient MonocotFrontiers in plant science · 2022
    Article
  12. Resurrection ofPhytoKeys · 2022
    Article
  13. Article
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  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Katarzyna KrawczykDepartment of Botany and Nature Protection, Faculty of Biology and Biotechnology, University of Warmia and Mazury in Olsztyn, Olsztyn, Poland. katarzyna.krawczyk@uwm.edu.pl.
Marcin NobisInstitute of Botany, Faculty of Biology and Earth Sciences, Jagiellonian University, Kraków, Poland.
Arkadiusz NowakPolish Academy of Sciences Botanical Garden - Center for Biological Diversity Conservation in Powsin, Warsaw, Poland.
Monika SzczecińskaDepartment of Botany and Nature Protection, Faculty of Biology and Biotechnology, University of Warmia and Mazury in Olsztyn, Olsztyn, Poland.
Jakub SawickiDepartment of Botany and Nature Protection, Faculty of Biology and Biotechnology, University of Warmia and Mazury in Olsztyn, Olsztyn, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The article takes up the problem of deficiency of molecular marker, which could illustrate molecular variability as well as phylogenetic relation within the genus of Stipa L. (Poaceae). Researches made so far hadn't delivered sufficient information about relationships between particular taxa from the genus of Stipa. In the present study, we analyzed variability and phylogenetic informativeness of nuclear ribosomal DNA in six species from the genus against five other species from Poaceae including a division of this region into functional elements and domains. Our results showed that the intergenic spacer region, and especially its part adjacent to 26 S nrDNA, is a molecular marker giving a real chance for a phylogeny reconstruction of Stipa. The region seems to be the most phylogenetically informative for Stipa from all the chloroplast and nuclear markers tested so far. Comparative analysis of nrDNA repeat units from Stipa to other representatives of Poaceae showed that their structure does not deviate from the general scheme. However, the rate of evolution within the inter-repeats in the IGS region is extremely high and therefore it predestines the region for phylogenetic analyses of Stipa at genus level or in shallower taxonomic scale.

Indexed as

Genes, rRNAGenetic VariationPhylogenyDNA, PlantDNA, Ribosomal SpacerPoaceaeDNA, PlantDNA, Ribosomal Spacer

Identifiers

PMID28912548
PMCPMC5599551

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