Evidence map›Paper›PMID 28912153›Full record

ArticleThe oncologist2017

Comprehensive Genomic Profiling of 282 Pediatric Low- and High-Grade Gliomas Reveals Genomic Drivers, Tumor Mutational Burden, and Hypermutation Signatures.

Adrienne Johnson, Eric Severson, Laurie Gay, Jo-Anne Vergilio, Julia Elvin, James Suh, Sugganth Daniel, Mandy Covert, Garrett M Frampton, Sigmund Hsu and 19 more

Open access · hybridAbstract read
In one paragraph

Article in The oncologist, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 150 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
150citing papers in PubMed, 1 pooled it
15.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

150 citing papers in PubMed, 1 synthesis or guideline pooled it, 286 citations in OpenAlex.

  1. Pediatric low-grade brainstem glioma: a review of current diagnosis and treatment paradigms in the molecular era.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2025
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90 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 6 institutions in 1 country.

Adrienne JohnsonFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Eric SeversonFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Laurie GayFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Jo-Anne VergilioFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Julia ElvinFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
James SuhFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Sugganth DanielFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Mandy CovertFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Garrett M FramptonFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Sigmund HsuDepartment of Neurosurgery, University of Texas Health Science Center, Houston, Texas, USA.
Glenn J LesserWake Forest Baptist Comprehensive Cancer Center, Winston-Salem, North Carolina, USA.
Kimberly Stogner-UnderwoodWake Forest Baptist Comprehensive Cancer Center, Winston-Salem, North Carolina, USA.
Ryan T MottWake Forest Baptist Comprehensive Cancer Center, Winston-Salem, North Carolina, USA.
Sarah Z RushDepartment of Pediatrics, Division of Hematology and Oncology, Children's Hospital Medical Center of Akron, Akron, Ohio, USA.
Jennifer J StankeDepartment of Pediatrics, Division of Hematology and Oncology, Children's Hospital Medical Center of Akron, Akron, Ohio, USA.
Sonika DahiyaDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
James SunFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Prasanth ReddyFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Zachary R ChalmersFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Rachel ErlichFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Yakov ChudnovskyFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
David FabrizioFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Alexa B SchrockFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Siraj AliFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Vincent MillerFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Philip J StephensFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
Jeffrey RossFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA.
John R CrawfordDepartment of Neurosciences and Pediatrics, University of California San Diego, San Diego, California, USA.
Shakti H RamkissoonFoundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA sramkissoon@foundationmedicine.com.
Foundation Medicine (United States)Wake Forest Baptist Comprehensive Cancer CenterAkron Children's Hospital · USThe University of Texas Health Science Center at Houston · USUniversity of California, San Diego · USWashington University in St. Louis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPediatric brain tumors are the leading cause of death for children with cancer in the U.S. Incorporating next-generation sequencing data for both pediatric low-grade (pLGGs) and high-grade gliomas (pHGGs) can inform diagnostic, prognostic, and therapeutic decision-making. MATERIALS AND

methodsWe performed comprehensive genomic profiling on 282 pediatric gliomas (157 pHGGs, 125 pLGGs), sequencing 315 cancer-related genes and calculating the tumor mutational burden (TMB; mutations per megabase [Mb]).

resultsIn pLGGs, we detected genomic alterations (GA) in 95.2% (119/125) of tumors.

conclusionComprehensive genomic profiling of pediatric gliomas provides objective data that promote diagnostic accuracy and enhance clinical decision-making. Additionally, TMB could be a biomarker to identify pediatric glioblastoma (GBM) patients who may benefit from immunotherapy. IMPLICATIONS FOR PRACTICE: By providing objective data to support diagnostic, prognostic, and therapeutic decision-making, comprehensive genomic profiling is necessary for advancing care for pediatric neuro-oncology patients. This article presents the largest cohort of pediatric low- and high-grade gliomas profiled by next-generation sequencing. Reportable alterations were detected in 95% of patients, including diagnostically relevant lesions as well as novel oncogenic fusions and mutations. Additionally, tumor mutational burden (TMB) is reported, which identifies a subpopulation of hypermutated glioblastomas that harbor deleterious mutations in DNA repair genes. This provides support for TMB as a potential biomarker to identify patients who may preferentially benefit from immune checkpoint inhibitors.

Indexed as

AdolescentChildChild, PreschoolDNA RepairFemaleGenome, HumanGliomaHigh-Throughput Nucleotide SequencingHumansInfantMaleMutationNeoplasm ProteinsTumor BurdenNeoplasm ProteinsClinical sequencingGliomaImmunotherapyPediatric neuro‐oncologyPrecision medicine

Identifiers

PMID28912153
PMCPMC5728033
OpenAlexW2754070259

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.