Evidence map›Paper›PMID 28911121›Full record

ArticleNucleic acids research2017

Engineering human PrimPol into an efficient RNA-dependent-DNA primase/polymerase.

Rubén Agudo, Patricia A Calvo, María I Martínez-Jiménez, Luis Blanco

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Engineering Polymerases for New Functions.Trends in biotechnology · 2019
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Rubén AgudoCentro de Biología Molecular 'Severo Ochoa' (CSIC-UAM), Cantoblanco, E-28049 Madrid, Spain.
Patricia A CalvoCentro de Biología Molecular 'Severo Ochoa' (CSIC-UAM), Cantoblanco, E-28049 Madrid, Spain.
María I Martínez-JiménezCentro de Biología Molecular 'Severo Ochoa' (CSIC-UAM), Cantoblanco, E-28049 Madrid, Spain.
Luis BlancoCentro de Biología Molecular 'Severo Ochoa' (CSIC-UAM), Cantoblanco, E-28049 Madrid, Spain.
Centro de Biología Molecular Severo Ochoa · ESUniversidad Autónoma de Madrid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have developed a straightforward fluorometric assay to measure primase-polymerase activity of human PrimPol (HsPrimPol). The sensitivity of this procedure uncovered a novel RNA-dependent DNA priming-polymerization activity (RdDP) of this enzyme. In an attempt to enhance HsPrimPol RdDP activity, we constructed a smart mutant library guided by prior sequence-function analysis, and tested this library in an adapted screening platform of our fluorometric assay. After screening less than 500 variants, we found a specific HsPrimPol mutant, Y89R, which displays 10-fold higher RdDP activity than the wild-type enzyme. The improvement of RdDP activity in the Y89R variant was due mainly to an increased in the stabilization of the preternary complex (protein:template:incoming nucleotide), a specific step preceding dimer formation. Finally, in support of the biotechnological potential of PrimPol as a DNA primer maker during reverse transcription, mutant Y89R HsPrimPol rendered up to 17-fold more DNA than with random hexamer primers.

Indexed as

Amino Acid SubstitutionBiological AssayArginineBenzothiazolesCloning, MolecularDiaminesDNA-Directed DNA PolymeraseDNA PrimaseDNA PrimersEscherichia coliFluorescent DyesFluorometryGene ExpressionGene LibraryHumansMultifunctional EnzymesArginineBenzothiazolesDiaminesDNA-Directed DNA PolymeraseDNA PrimaseDNA PrimersFluorescent DyesMultifunctional EnzymesOligonucleotidesOrganic ChemicalsPrimPol protein, humanQuinolinesRNARNA-Directed DNA PolymeraseSYBR Green ITyrosine

Identifiers

PMID28911121
PMCPMC5587808
OpenAlexW2738405048

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.