Evidence map›Paper›PMID 28911102›Full record

ArticleNucleic acids research2017

FANCJ helicase controls the balance between short- and long-tract gene conversions between sister chromatids.

Sarmi Nath, Kumar Somyajit, Anup Mishra, Ralph Scully, Ganesh Nagaraju

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Sarmi NathDepartment of Biochemistry, Indian Institute of Science, Bangalore 560012, India.
Kumar SomyajitDepartment of Biochemistry, Indian Institute of Science, Bangalore 560012, India.
Anup MishraDepartment of Biochemistry, Indian Institute of Science, Bangalore 560012, India.
Ralph ScullyBeth Israel Deaconess Medical Center and Harvard Medical School, 330 Brookline Avenue, Boston, MA, USA.
Ganesh NagarajuDepartment of Biochemistry, Indian Institute of Science, Bangalore 560012, India.
Indian Institute of Science Bangalore · INHarvard University · US

Funding

ANALYSIS OF BRCA1 RECOMBINATION FUNCTIONSR01CA095175 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI SCULLY, RALPH · 2002 to 2021
$4.9M
FANCM in repair of stalled replication forksR01CA217991 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI SCULLY, RALPH · 2017 to 2021
$2.0M
NCI NIH HHS R01 CA095175NCI NIH HHS R01 CA217991
6 · The paper itself

Abstract

The FANCJ DNA helicase is linked to hereditary breast and ovarian cancers as well as bone marrow failure disorder Fanconi anemia (FA). Although FANCJ has been implicated in the repair of DNA double-strand breaks (DSBs) by homologous recombination (HR), the molecular mechanism underlying the tumor suppressor functions of FANCJ remains obscure. Here, we demonstrate that FANCJ deficient human and hamster cells exhibit reduction in the overall gene conversions in response to a site-specific chromosomal DSB induced by I-SceI endonuclease. Strikingly, the gene conversion events were biased in favour of long-tract gene conversions in FANCJ depleted cells. The fine regulation of short- (STGC) and long-tract gene conversions (LTGC) by FANCJ was dependent on its interaction with BRCA1 tumor suppressor. Notably, helicase activity of FANCJ was essential for controlling the overall HR and in terminating the extended repair synthesis during sister chromatid recombination (SCR). Moreover, cells expressing FANCJ pathological mutants exhibited defective SCR with an increased frequency of LTGC. These data unravel the novel function of FANCJ helicase in regulating SCR and SCR associated gene amplification/duplications and imply that these functions of FANCJ are crucial for the genome maintenance and tumor suppression.

Indexed as

Recombinational DNA RepairAnimalsBasic-Leucine Zipper Transcription FactorsBRCA1 ProteinCell Line, TumorCHO CellsChromatidsCricetulusDeoxyribonucleases, Type II Site-SpecificDNADNA Breaks, Double-StrandedFanconi Anemia Complementation Group ProteinsG2 Phase Cell Cycle CheckpointsGene Expression RegulationHomologous RecombinationHumansBACH1 protein, humanBasic-Leucine Zipper Transcription FactorsBRCA1 ProteinBRCA1 protein, humanDeoxyribonucleases, Type II Site-SpecificDNAFanconi Anemia Complementation Group ProteinsSaccharomyces cerevisiae ProteinsSCEI protein, S cerevisiae

Identifiers

PMID28911102
PMCPMC5587752
OpenAlexW2724659518

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.