Evidence map›Paper›PMID 28911099›Full record

ArticleNucleic acids research2017

Bacillus subtilis RecA with DprA-SsbA antagonizes RecX function during natural transformation.

Shimin Le, Ester Serrano, Ryo Kawamura, Begoña Carrasco, Jie Yan, Juan C Alonso

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
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  4. Review
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  6. Genomic signatures of cold adaptation in the family Colwelliaceae.Extremophiles : life under extreme conditions · 2024
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  7. Review
  8. International journal of molecular sciences · 2023
    Article
  9. Article
  10. Article
  11. The RecD2 helicase balances RecA activities.Nucleic acids research · 2022
    Article
  12. Article
  13. Article
  14. Article
  15. Frontiers in microbiology · 2020
    Article
  16. Frontiers in molecular biosciences · 2020
    Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Shimin LeDepartment of Physics, National University of Singapore, 117551, Singapore.
Ester SerranoDepartment of Microbial Biotechnology, Centro Nacional de Biotecnología (CNB-CSIC), Darwin 3, Cantoblanco, 28049 Madrid, Spain.
Ryo KawamuraDepartment of Physics, National University of Singapore, 117551, Singapore.
Begoña CarrascoDepartment of Microbial Biotechnology, Centro Nacional de Biotecnología (CNB-CSIC), Darwin 3, Cantoblanco, 28049 Madrid, Spain.
Jie YanDepartment of Physics, National University of Singapore, 117551, Singapore.
Juan C AlonsoDepartment of Microbial Biotechnology, Centro Nacional de Biotecnología (CNB-CSIC), Darwin 3, Cantoblanco, 28049 Madrid, Spain.
Centro Nacional de Biotecnología · ESNational University of Singapore · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacillus subtilis DprA and RecX proteins, which interact with RecA, are crucial for efficient chromosomal and plasmid transformation. We showed that RecA, in the rATP·Mg2+ bound form (RecA·ATP), could not compete with RecX, SsbA or SsbB for assembly onto single-stranded (ss)DNA, but RecA·dATP partially displaced these proteins from ssDNA. RecX promoted reversible depolymerization of preformed RecA·ATP filaments. The two-component DprA-SsbA mediator reversed the RecX negative effect on RecA filament extension, but not DprA or DprA and SsbB. In the presence of DprA-SsbA, RecX added prior to RecA·ATP inhibited DNA strand exchange, but this inhibition was reversed when RecX was added after RecA. We propose that RecA nucleation is more sensitive to RecX action than is RecA filament growth. DprA-SsbA facilitates formation of an active RecA filament that directly antagonizes the inhibitory effects of RecX. RecX and DprA enable chromosomal transformation by altering RecA filament dynamics. DprA-SsbA and RecX proteins constitute a new regulatory network of RecA function. DprA-SsbA contributes to the formation of an active RecA filament and directly antagonizes the inhibitory effects of RecX during natural transformation.

Indexed as

Gene Expression Regulation, BacterialTransformation, BacterialAdenosine TriphosphateBacillus subtilisBacterial ProteinsChromosomes, BacterialDNA, BacterialDNA-Binding ProteinsDNA, Single-StrandedKineticsMembrane ProteinsPlasmidsRec A RecombinasesRecombination, GeneticAdenosine TriphosphateBacterial ProteinsDNA, BacterialDNA-Binding ProteinsDNA, Single-StrandedDprA protein, bacteriaMembrane ProteinsRec A RecombinasesRecX protein, Xanthomonas campestris

Identifiers

PMID28911099
PMCPMC5587729
OpenAlexW2729174837

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.