Evidence map›Paper›PMID 28910856›Full record

ArticleCurrent protocols in chemical biology2017

High-Throughput Screening of HECT E3 Ubiquitin Ligases Using UbFluor.

Peter K Foote, David T Krist, Alexander V Statsyuk

Open access · greenAbstract read
In one paragraph

Article in Current protocols in chemical biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Peter K FooteDepartment of Chemistry, Chemistry of Life Processes Institute, Northwestern University, Evanston, Illinois.
David T KristDepartment of Chemistry, Chemistry of Life Processes Institute, Northwestern University, Evanston, Illinois.
Alexander V StatsyukDepartment of Chemistry, Chemistry of Life Processes Institute, Northwestern University, Evanston, Illinois.
Northwestern University · US

Funding

Molecular Biophysics Training Program at Northwestern UniversityT32GM008382 · NIGMS · NORTHWESTERN UNIVERSITY · PI RADHAKRISHNAN, ISHWAR · 1990 to 2020
$4.3M
Pharmacological Inhibitors of Nedd4 ubiquitin ligase as anticancer therapeuticsR01GM115632 · NIGMS · UNIVERSITY OF HOUSTON · PI STATSYUK, ALEXANDER V · 2015 to 2019
$1.5M
NIGMS NIH HHS R01 GM115632NIGMS NIH HHS T32 GM008382
6 · The paper itself

Abstract

HECT E3 ubiquitin ligases are responsible for many human disease phenotypes and are promising drug targets; however, screening assays for HECT E3 inhibitors are inherently complex, requiring upstream E1 and E2 enzymes as well as ubiquitin, ATP, and detection reagents. Intermediate ubiquitin thioesters and a complex mixture of polyubiquitin products provide further opportunities for off-target inhibition and increase the complexity of the assay. UbFluor is a novel ubiquitin thioester that bypasses the E1 and E2 enzymes and undergoes direct transthiolation with HECT E3 ligases. The release of fluorophore upon transthiolation allows fluorescence polarization detection of HECT E3 activity. In the presence of inhibitors, HECT E3 activity is ablated, and thus no reaction and no change in FP are observed. This assay has been adapted for high-throughput screening of small molecules against HECT E3 ligases, and its utility has been proven in the discovery of HECT E3 ligase inhibitors. © 2017 by John Wiley & Sons, Inc.

Indexed as

Enzyme InhibitorsEstersFluorescenceHigh-Throughput Screening AssaysHumansUbiquitinUbiquitin-Protein LigasesEnzyme InhibitorsEstersUbiquitinUbiquitin-Protein Ligasesfluorescence polarizationHECT E3 ligasehigh-throughput screenthioesterubiquitin

Identifiers

PMID28910856
PMCPMC5650195
OpenAlexW2803708351

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.