Evidence map›Paper›PMID 28905451›Full record

ArticleStem cells (Dayton, Ohio)2017

Gene-Edited Human Kidney Organoids Reveal Mechanisms of Disease in Podocyte Development.

Yong Kyun Kim, Ido Refaeli, Craig R Brooks, Peifeng Jing, Ramila E Gulieva, Michael R Hughes, Nelly M Cruz, Yannan Liu, Angela J Churchill, Yuliang Wang and 7 more

Abstract read
In one paragraph

Article in Stem cells (Dayton, Ohio), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. A review of 3D bioprinting for organoids.Medical review (2021) · 2025
    Review
  8. The Life of a Kidney Podocyte.Acta physiologica (Oxford, England) · 2025
    Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Genome editing and kidney health.Clinical kidney journal · 2024
    Review
  14. Review
  15. Article
  16. Review
  17. Single-cell RNA sequencing and kidney organoid differentiation.Clinical and experimental nephrology · 2023
    Review
  18. Article
  19. Harnessing mechanobiology for kidney organoid research.Frontiers in cell and developmental biology · 2023
    Review
  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Yong Kyun KimDivision of Nephrology, Department of Medicine, University of Washington School of Medicine, Seattle, Washington, USA.
Ido RefaeliThe Biomedical Research Centre, University of British Columbia, Vancouver, British Columbia, Canada.
Craig R BrooksDivision of Nephrology, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Peifeng JingDepartment of Electrical Engineering, University of Washington, Seattle, Washington, USA.
Ramila E GulievaDivision of Nephrology, Department of Medicine, University of Washington School of Medicine, Seattle, Washington, USA.
Michael R HughesThe Biomedical Research Centre, University of British Columbia, Vancouver, British Columbia, Canada.
Nelly M CruzDivision of Nephrology, Department of Medicine, University of Washington School of Medicine, Seattle, Washington, USA.
Yannan LiuDepartment of Electrical Engineering, University of Washington, Seattle, Washington, USA.
Angela J ChurchillDivision of Nephrology, Department of Medicine, University of Washington School of Medicine, Seattle, Washington, USA.
Yuliang WangInstitute for Stem Cell and Regenerative Medicine, Department of Medicine, University of Washington School of Medicine, Seattle, Washington, USA.
Hongxia FuInstitute for Stem Cell and Regenerative Medicine, Department of Medicine, University of Washington School of Medicine, Seattle, Washington, USA.
Jeffrey W PippinDivision of Nephrology, Department of Medicine, University of Washington School of Medicine, Seattle, Washington, USA.
Lih Y LinDepartment of Electrical Engineering, University of Washington, Seattle, Washington, USA.
Stuart J ShanklandDivision of Nephrology, Department of Medicine, University of Washington School of Medicine, Seattle, Washington, USA.
A Wayne VoglDepartment of Cellular and Physiological Sciences, University of British Columbia, Vancouver, British Columbia, Canada.
Kelly M McNagnyThe Biomedical Research Centre, University of British Columbia, Vancouver, British Columbia, Canada.
Benjamin S FreedmanDivision of Nephrology, Department of Medicine, University of Washington School of Medicine, Seattle, Washington, USA.ORCID 0000-0003-2228-7383

Funding

Self Renewal and Differentiation of Human Embryonic Stem CellsP01GM081619 · NIGMS · UNIVERSITY OF WASHINGTON · PI RUOHOLA-BAKER, HANNELE · 2007 to 2017
$20.6M
LABORATORY OF DEVELOPMENTAL BIOLOGYR24HD000836 · NICHD · UNIVERSITY OF WASHINGTON · PI Ian Amos Glass · 1995 to 2026
$16.9M
Juxta-glomerular cells serve as glomerular epithelial cell progenitors in glomerular diseaseR01DK097598 · NIDDK · UNIVERSITY OF WASHINGTON · PI SHANKLAND, STUART JAMES, WESSELY, OLIVER · 2014 to 2022
$5.2M
Rebuilding the glomerular filtration barrier by regenerating adult podocytesUH3DK107343 · NIDDK · UNIVERSITY OF WASHINGTON · PI SHANKLAND, STUART JAMES, ZHENG, YING · 2017 to 2019
$1.3M
Mechanoregulatory mechanisms of von Willebrand disease and thrombosisK25HL135432 · NHLBI · UNIVERSITY OF WASHINGTON · PI FU, HONGXIA · 2017 to 2021
$890k
Rebuilding the glomerular filtration barrier by regenerating adult podocytesUH2DK107343 · NIDDK · UNIVERSITY OF WASHINGTON · PI SHANKLAND, STUART JAMES, ZHENG, YING · 2015 to 2016
$855k
Modeling Polycystic Kidney Disease Using Human Induced Pluripotent Stem CellsK01DK102826 · NIDDK · UNIVERSITY OF WASHINGTON · PI FREEDMAN, BENJAMIN SOLOMON · 2014 to 2018
$743k
NHLBI NIH HHS K25 HL135432NICHD NIH HHS R24 HD000836NIDDK NIH HHS K01 DK102826NIDDK NIH HHS R01 DK097598NIDDK NIH HHS UH2 DK107343NIDDK NIH HHS UH3 DK107343NIGMS NIH HHS P01 GM081619
6 · The paper itself

Abstract

A critical event during kidney organogenesis is the differentiation of podocytes, specialized epithelial cells that filter blood plasma to form urine. Podocytes derived from human pluripotent stem cells (hPSC-podocytes) have recently been generated in nephron-like kidney organoids, but the developmental stage of these cells and their capacity to reveal disease mechanisms remains unclear. Here, we show that hPSC-podocytes phenocopy mammalian podocytes at the capillary loop stage (CLS), recapitulating key features of ultrastructure, gene expression, and mutant phenotype. hPSC-podocytes in vitro progressively establish junction-rich basal membranes (nephrin

Indexed as

AnimalsCell AdhesionCell DifferentiationGene EditingHumansKidneyKidney GlomerulusMiceOrganoidsPluripotent Stem CellsPodocytesSialoglycoproteinspodocalyxinSialoglycoproteinsAdhesion receptorsBiophysicsCell adhesionDevelopmental biologyDifferentiationFocal segmental glomerulosclerosisFoot processesGene targetingGenome editingKidneyNephrinNephrogenesisPluripotent stem cellsPodocalyxinPodocinSlit diaphragm

Identifiers

PMID28905451
PMCPMC5742857

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.