Evidence map›Paper›PMID 28905209›Full record

ArticleClinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico2018

Expression differences of genes in the PI3K/AKT, WNT/b-catenin, SHH, NOTCH and MAPK signaling pathways in CD34+ hematopoietic cells obtained from chronic phase patients with chronic myeloid leukemia and from healthy controls.

R de Cássia Viu Carrara, A M Fontes, K J Abraham, M D Orellana, S K Haddad, P V B Palma, R A Panepucci, M A Zago, D T Covas

Open access · greenAbstract read
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In one paragraph

Article in Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Management of Chronic Myeloid Leukemia in Children and Young Adults.Current hematologic malignancy reports · 2022
    Review
  4. Article
  5. Chronic Myelogenous Leukemia in Childhood.Current oncology reports · 2021
    Review
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

R de Cássia Viu CarraraCenter for Cell-Based Therapy of the Regional Blood Center of Ribeirão Preto, Avenida Tenente Catao Roxo, 2501, Monte Alegre, Ribeirao Preto, Sao Paulo, 14051-140, Brazil. rcvcarrara@hotmail.com.ORCID http://orcid.org/0000-0002-8582-2358
A M FontesCenter for Cell-Based Therapy of the Regional Blood Center of Ribeirão Preto, Avenida Tenente Catao Roxo, 2501, Monte Alegre, Ribeirao Preto, Sao Paulo, 14051-140, Brazil.ORCID http://orcid.org/0000-0002-4878-417X
K J AbrahamDepartment of Puericulture and Pediatrics, Medical School of Ribeirão Preto, University of São Paulo, Avenida Bandeirantes, 3900, Monte Alegre, Ribeirao Preto, Sao Paulo, 14049-900, Brazil.
M D OrellanaCenter for Cell-Based Therapy of the Regional Blood Center of Ribeirão Preto, Avenida Tenente Catao Roxo, 2501, Monte Alegre, Ribeirao Preto, Sao Paulo, 14051-140, Brazil.
S K HaddadCenter for Cell-Based Therapy of the Regional Blood Center of Ribeirão Preto, Avenida Tenente Catao Roxo, 2501, Monte Alegre, Ribeirao Preto, Sao Paulo, 14051-140, Brazil.
P V B PalmaCenter for Cell-Based Therapy of the Regional Blood Center of Ribeirão Preto, Avenida Tenente Catao Roxo, 2501, Monte Alegre, Ribeirao Preto, Sao Paulo, 14051-140, Brazil.
R A PanepucciCenter for Cell-Based Therapy of the Regional Blood Center of Ribeirão Preto, Avenida Tenente Catao Roxo, 2501, Monte Alegre, Ribeirao Preto, Sao Paulo, 14051-140, Brazil.
M A ZagoCenter for Cell-Based Therapy of the Regional Blood Center of Ribeirão Preto, Avenida Tenente Catao Roxo, 2501, Monte Alegre, Ribeirao Preto, Sao Paulo, 14051-140, Brazil.
D T CovasCenter for Cell-Based Therapy of the Regional Blood Center of Ribeirão Preto, Avenida Tenente Catao Roxo, 2501, Monte Alegre, Ribeirao Preto, Sao Paulo, 14051-140, Brazil.
Universidade de São Paulo · BRUniversidade de Ribeirão Preto · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThe fusion gene BCR-ABL has an important role to the progression of chronic myeloid leukemia (CML) and several signaling pathways have been characterized as responsible for the terminal blastic phase (BP). However, the initial phase, the chronic phase (CP), is long lasting and there is much yet to be understood about the critical role of BCR-ABL in this phase. This study aims to evaluate transcriptional deregulation in CD34+ hematopoietic cells (CD34+ cells) from patients with untreated newly diagnosed CML compared with CD34+HC from healthy controls.

methodsGene expression profiling in CML-CD34 cells and CD34 cells from healthy controls were used for this purpose with emphasis on five main pathways important for enhanced proliferation/survival, enhanced self-renewal and block of myeloid differentiation.

resultsWe found 835 genes with changed expression levels (fold change ≥ ±2) in CML-CD34 cells compared with CD34 cells. These include genes belonging to PI3K/AKT, WNT/b-catenin, SHH, NOTCH and MAPK signaling pathways. Four of these pathways converge to MYC activation. We also identified five transcripts upregulated in CD34-CML patients named OSBPL9, MEK2, p90RSK, TCF4 and FZD7 that can be potential biomarkers in CD34-CML-CP.

conclusionWe show several mRNAs up- or downregulated in CD34-CML during the chronic phase.

Indexed as

TranscriptomeAdolescentAdultAgedAged, 80 and overAntigens, CD34Biomarkers, TumorExtracellular Signal-Regulated MAP KinasesFemaleHedgehog ProteinsHematopoietic Stem CellsHumansLeukemia, Myelogenous, Chronic, BCR-ABL PositiveMaleMiddle AgedPhosphatidylinositol 3-KinasesAntigens, CD34Biomarkers, TumorExtracellular Signal-Regulated MAP KinasesHedgehog ProteinsPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktReceptors, NotchSHH protein, humanBCR-ABLCD34+ cellsChronic myeloid leukemiaChronic phaseGene expressionmicroRNA

Identifiers

PMID28905209
OpenAlexW2756269835

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.