Evidence map›Paper›PMID 28905147›Full record

ReviewCellular and molecular life sciences : CMLS2018

Evaluation and control of miRNA-like off-target repression for RNA interference.

Heeyoung Seok, Haejeong Lee, Eun-Sook Jang, Sung Wook Chi

Abstract readReview
In one paragraph

Review in Cellular and molecular life sciences : CMLS, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed.

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  10. MiR-324-5p mitigates experimental acute pancreatitis by suppressing Rock2 expression.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
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10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Heeyoung SeokDivision of Life Sciences, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Korea.
Haejeong LeeDivision of Life Sciences, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Korea.
Eun-Sook JangDivision of Life Sciences, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Korea.
Sung Wook ChiDivision of Life Sciences, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Korea. chi13@korea.ac.kr.ORCID 0000-0002-8035-8242

Funding

National Research Foundation of Korea NRF-2015R1A5A1009024National Research Foundation of Korea NRF-2016R1A6A3A11931948National Research Foundation of Korea NRF-2017R1D1A1B03030852
6 · The paper itself

Abstract

RNA interference (RNAi) has been widely adopted to repress specific gene expression and is easily achieved by designing small interfering RNAs (siRNAs) with perfect sequence complementarity to the intended target mRNAs. Although siRNAs direct Argonaute (Ago), a core component of the RNA-induced silencing complex (RISC), to recognize and silence target mRNAs, they also inevitably function as microRNAs (miRNAs) and suppress hundreds of off-targets. Such miRNA-like off-target repression is potentially detrimental, resulting in unwanted toxicity and phenotypes. Despite early recognition of the severity of miRNA-like off-target repression, this effect has often been overlooked because of difficulties in recognizing and avoiding off-targets. However, recent advances in genome-wide methods and knowledge of Ago-miRNA target interactions have set the stage for properly evaluating and controlling miRNA-like off-target repression. Here, we describe the intrinsic problems of miRNA-like off-target effects caused by canonical and noncanonical interactions. We particularly focus on various genome-wide approaches and chemical modifications for the evaluation and prevention of off-target repression to facilitate the use of RNAi with secured specificity.

Indexed as

Gene Expression RegulationAnimalsArgonaute ProteinsBinding SitesHumansMicroRNAsRNA-Induced Silencing ComplexRNA InterferenceRNA, Small InterferingArgonaute ProteinsMicroRNAsRNA-Induced Silencing ComplexRNA, Small InterferingAbasic pivotAgo HITS-CLIPChemical modificationmiRNA seed sitesNoncanonical target sitesOff-target effectsRibo-SeqRNAi therapeuticsRNA-Seq

Identifiers

PMID28905147
PMCPMC11105550

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.