Evidence map›Paper›PMID 28904797›Full record

ArticleMovement ecology2017

A cross-validation-based approach for delimiting reliable home range estimates.

Eric R Dougherty, Colin J Carlson, Jason K Blackburn, Wayne M Getz

Erratum issuedAbstract read
In one paragraph

Article in Movement ecology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. ModelingInternational journal of environmental research and public health · 2019
    Review
  5. Ecological metrics and methods for GPS movement data.International journal of geographical information science : IJGIS · 2018
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Eric R DoughertyDepartment of Environmental Science, Policy, and Management, University of California, Berkeley, Berkeley, CA USA.ORCID 0000-0001-5140-1646
Colin J CarlsonDepartment of Environmental Science, Policy, and Management, University of California, Berkeley, Berkeley, CA USA.
Jason K BlackburnSpatial Epidemiology and Ecology Research Laboratory, Department of Geography, University of Florida, Gainesville, FL USA.
Wayne M GetzDepartment of Environmental Science, Policy, and Management, University of California, Berkeley, Berkeley, CA USA.

Funding

The ecology of environmentally maintained episodic anthrax in Esotha, NamibiaR01GM083863 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI GETZ, WAYNE M · 2008 to 2011
$1.7M
Spatio-temporally explicit estimation of R0 for pathogens with environmentally-mediated transmissionR01GM117617 · NIGMS · UNIVERSITY OF FLORIDA · PI BLACKBURN, JASON K · 2015 to 2018
$1.5M
NIGMS NIH HHS R01 GM083863NIGMS NIH HHS R01 GM117617
6 · The paper itself

Abstract

backgroundWith decreasing costs of GPS telemetry devices, data repositories of animal movement paths are increasing almost exponentially in size. A series of complex statistical tools have been developed in conjunction with this increase in data. Each of these methods offers certain improvements over previously proposed methods, but each has certain assumptions or shortcomings that make its general application difficult. In the case of the recently developed Time Local Convex Hull (T-LoCoH) method, the subjectivity in parameter selection serves as one of the primary impediments to its more widespread use. While there are certain advantages to the flexibility it offers for question-driven research, the lack of an objective approach for parameter selection may prevent some users from exploring the benefits of the method.

methodsHere we present a cross-validation-based approach for selecting parameter values to optimize the T-LoCoH algorithm. We demonstrate the utility of the approach using a case study from the Etosha National Park anthrax system.

resultsUtilizing the proposed algorithm, rather than the guidelines in the T-LoCoH documentation, results in significantly different values for derived site fidelity metrics.

conclusionsDue to its basis in principles of cross-validation, the application of this method offers a more objective approach than the relatively subjective guidelines set forth in the T-LoCoH documentation and enables a more accurate basis for the comparison of home ranges among individuals and species, as well as among studies.

Indexed as

cross-validationDurationEpidemiologyHome rangeTime Local Convex HullsT-LoCoHVisitation

Identifiers

PMID28904797
PMCPMC5586009

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.