ArticleEcology and evolution2017
Discovery and characterization of single nucleotide polymorphisms in two anadromous alosine fishes of conservation concern.
Article in Ecology and evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed.
- A novel SNP assay reveals increased genetic variability and abundance following translocations to a remnant Allegheny woodrat population.BMC ecology and evolution · 2022Article
- Review
- Genomic population structure of Striped Bass (Evolutionary applications · 2020Article
- Applying genomic data in wildlife monitoring: Development guidelines for genotyping degraded samples with reduced single nucleotide polymorphism panels.Molecular ecology resources · 2020Article
- Restoration-mediated secondary contact leads to introgression of alewife ecotypes separated by a colonial-era dam.Evolutionary applications · 2020Article
- Discovery and characterization of single nucleotide polymorphisms in two anadromous alosine fishes of conservation concern.Ecology and evolution · 2017Article
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Authors and funding
5 authors.
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Abstract
Freshwater habitat alteration and marine fisheries can affect anadromous fish species, and populations fluctuating in size elicit conservation concern and coordinated management. We describe the development and characterization of two sets of 96 single nucleotide polymorphism (SNP) assays for two species of anadromous alosine fishes, alewife and blueback herring (collectively known as river herring), that are native to the Atlantic coast of North America. We used data from high-throughput DNA sequencing to discover SNPs and then developed molecular genetic assays for genotyping sets of 96 individual loci in each species. The two sets of assays were validated with multiple populations that encompass both the geographic range and the known regional genetic stocks of both species. The SNP panels developed herein accurately resolved the genetic stock structure for alewife and blueback herring that was previously identified using microsatellites and assigned individuals to regional stock of origin with high accuracy. These genetic markers, which generate data that are easily shared and combined, will greatly facilitate ongoing conservation and management of river herring including genetic assignment of marine caught individuals to stock of origin.
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