Evidence map›Paper›PMID 28903894›Full record

ArticleJMIR medical informatics2017

Prototype Development: Context-Driven Dynamic XML Ophthalmologic Data Capture Application.

Peggy Peissig, Kelsey M Schwei, Christopher Kadolph, Joseph Finamore, Efrain Cancel, Catherine A McCarty, Asha Okorie, Kate L Thomas, Jennifer Allen Pacheco, Jyotishman Pathak and 7 more

Abstract read
In one paragraph

Article in JMIR medical informatics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Peggy PeissigMarshfield Clinic Research Institute, Biomedical Informatics Research Center, Marshfield, WI, United States.ORCID http://orcid.org/0000-0003-4156-0189
Kelsey M SchweiMarshfield Clinic Research Institute, Center for Oral and Systemic Health, Marshfield, WI, United States.ORCID http://orcid.org/0000-0003-0504-5331
Christopher KadolphMarshfield Clinic Research Institute, Biomedical Informatics Research Center, Marshfield, WI, United States.ORCID http://orcid.org/0000-0002-8748-249X
Joseph FinamoreMarshfield Clinic Research Institute, Biomedical Informatics Research Center, Marshfield, WI, United States.ORCID http://orcid.org/0000-0002-8217-691X
Efrain CancelMarshfield Clinic, Department of Ophthalmology, Marshfield, WI, United States.ORCID http://orcid.org/0000-0002-5678-2393
Catherine A McCartyEssentia Institute of Rural Health, Center for Research and Education, Duluth, MN, United States.ORCID http://orcid.org/0000-0003-1089-0142
Asha OkorieMarshfield Clinic, Department of Ophthalmology, Marshfield, WI, United States.ORCID http://orcid.org/0000-0002-4501-3425
Kate L ThomasMarshfield Clinic Research Institute, Biomedical Informatics Research Center, Marshfield, WI, United States.ORCID http://orcid.org/0000-0002-4756-5151
Jennifer Allen PachecoCenter for Genetic Medicine, Northwestern University, Chicago, IL, United States.ORCID http://orcid.org/0000-0001-8021-5818
Jyotishman PathakWeill Cornell Medical College, Healthcare Policy and Research, Cornell University, New York, NY, United States.ORCID http://orcid.org/0000-0002-4856-410X
Stephen B EllisPersonalized Medicine Institute, Mount Sinai, New York, NY, United States.ORCID http://orcid.org/0000-0001-6944-2876
Joshua C DennySchool of Medicine, Biomedical Informatics, Vanderbilt University, Nashville, TN, United States.ORCID http://orcid.org/0000-0002-3049-7332
Luke V RasmussenDivision of Health and Biomedical Informatics, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States.ORCID http://orcid.org/0000-0002-4497-8049
Gerard TrompAutism and Developmental Medicine Institute (ADMI), Geisinger, Danville, PA, United States.ORCID http://orcid.org/0000-0002-7761-0806
Marc S WilliamsGenomic Medical Institute, Geisinger, Danville, PA, United States.ORCID http://orcid.org/0000-0001-6165-8701
Tamara R VrabecDepartment of Ophthalmology, Geisinger, Danville, PA, United States.ORCID http://orcid.org/0000-0003-0135-1251
Murray H BrilliantMarshfield Clinic Research Foundation, Human Genetics, Marshfield, WI, United States.ORCID http://orcid.org/0000-0002-2753-0699

Funding

Institutional Clinical and Translational Science AwardUL1TR000427 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI DREZNER, MARC KENNETH · 2012 to 2016
$32.2M
INSTITUTIONAL CTSA (UW-MADISON): CLINICAL TRIALSUL1RR025011 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI DREZNER, MARC KENNETH · 2007 to 2011
$29.5M
Genomic Basis of Susceptibility to COVID-19 Infection and its ComplicationsU01HG006379 · NHGRI · MAYO CLINIC ROCHESTER · PI Richard R. Sharp · 2011 to 2026
$16.5M
The Electronic Medical Records and Genomics (eMERGE) Network Phase III Coordinating Center (U01)U01HG008701 · NHGRI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PETERSON, JOSEPH F. · 2015 to 2019
$7.1M
eMERGE Coordinating Center - Administrative SupplementU01HG006385 · NHGRI · VANDERBILT UNIVERSITY · PI HARRIS, PAUL A. · 2011 to 2014
$5.4M
Biorepository for Genomic Medicine in diverse CommunitiesU01HG006380 · NHGRI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BOTTINGER, ERWIN P. · 2011 to 2015
$4.5M
OMOP information model for eMERGE phenotypingU01HG008679 · NHGRI · GEISINGER CLINIC · PI WILLIAMS, MARC S. · 2015 to 2019
$4.4M
Geisinger eGenonic Medicine (GeM) ProgramU01HG006382 · NHGRI · GEISINGER CLINIC · PI CAREY, DAVID J., WILLIAMS, MARC S. · 2011 to 2014
$4.3M
A Personalized Genomic Medicine Pilot Program Using the NJgene eMERGE ExperienceU01HG006388 · NHGRI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI CHISHOLM, REX L, SMITH, MAUREEN E · 2011 to 2014
$4.1M
IRIS: Incorporating Research Into SightU01HG006389 · NHGRI · ESSENTIA INSTITUTE OF RURAL HEALTH · PI MCCARTY, CATHERINE ANNE · 2011 to 2014
$4.1M
Vanderbilt Genome Electronic Records ProjectU01HG006378 · NHGRI · VANDERBILT UNIVERSITY · PI RODEN, DAN M · 2011 to 2014
$4.0M
NCATS NIH HHS UL1 TR000427NCRR NIH HHS UL1 RR025011NHGRI NIH HHS U01 HG006378NHGRI NIH HHS U01 HG006379NHGRI NIH HHS U01 HG006380NHGRI NIH HHS U01 HG006382NHGRI NIH HHS U01 HG006385NHGRI NIH HHS U01 HG006388NHGRI NIH HHS U01 HG006389NHGRI NIH HHS U01 HG008679NHGRI NIH HHS U01 HG008701
6 · The paper itself

Abstract

backgroundThe capture and integration of structured ophthalmologic data into electronic health records (EHRs) has historically been a challenge. However, the importance of this activity for patient care and research is critical.

objectiveThe purpose of this study was to develop a prototype of a context-driven dynamic extensible markup language (XML) ophthalmologic data capture application for research and clinical care that could be easily integrated into an EHR system.

methodsStakeholders in the medical, research, and informatics fields were interviewed and surveyed to determine data and system requirements for ophthalmologic data capture. On the basis of these requirements, an ophthalmology data capture application was developed to collect and store discrete data elements with important graphical information.

resultsThe context-driven data entry application supports several features, including ink-over drawing capability for documenting eye abnormalities, context-based Web controls that guide data entry based on preestablished dependencies, and an adaptable database or XML schema that stores Web form specifications and allows for immediate changes in form layout or content. The application utilizes Web services to enable data integration with a variety of EHRs for retrieval and storage of patient data.

conclusionsThis paper describes the development process used to create a context-driven dynamic XML data capture application for optometry and ophthalmology. The list of ophthalmologic data elements identified as important for care and research can be used as a baseline list for future ophthalmologic data collection activities.

Indexed as

data acquisitiondata collectionelectronic health recordsextensible markup language XMLophthalmology

Identifiers

PMID28903894
PMCPMC5617903

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.