Evidence map›Paper›PMID 28902459›Full record

ArticleAmerican journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics2017

Exome sequences of multiplex, multigenerational families reveal schizophrenia risk loci with potential implications for neurocognitive performance.

Mark Z Kos, Melanie A Carless, Juan Peralta, Joanne E Curran, Ellen E Quillen, Marcio Almeida, August Blackburn, Lucy Blondell, David R Roalf, Michael F Pogue-Geile and 5 more

Open access · greenAbstract read
In one paragraph

Article in American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Mark Z KosSouth Texas Diabetes and Obesity Institute, The University of Texas Rio Grande Valley, San Antonio and Brownsville, Texas.ORCID http://orcid.org/0000-0003-3129-7057
Melanie A CarlessDepartment of Genetics, Texas Biomedical Research Institute, San Antonio, Texas.
Juan PeraltaSouth Texas Diabetes and Obesity Institute, The University of Texas Rio Grande Valley, San Antonio and Brownsville, Texas.
Joanne E CurranSouth Texas Diabetes and Obesity Institute, The University of Texas Rio Grande Valley, San Antonio and Brownsville, Texas.
Ellen E QuillenDepartment of Genetics, Texas Biomedical Research Institute, San Antonio, Texas.ORCID http://orcid.org/0000-0003-2033-8693
Marcio AlmeidaSouth Texas Diabetes and Obesity Institute, The University of Texas Rio Grande Valley, San Antonio and Brownsville, Texas.
August BlackburnSouth Texas Diabetes and Obesity Institute, The University of Texas Rio Grande Valley, San Antonio and Brownsville, Texas.
Lucy BlondellSouth Texas Diabetes and Obesity Institute, The University of Texas Rio Grande Valley, San Antonio and Brownsville, Texas.
David R RoalfDepartment of Psychiatry, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania.
Michael F Pogue-GeileDepartment of Psychology, University of Pittsburgh, Pittsburgh, Pennsylvania.
Ruben C GurDepartment of Psychiatry, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania.
Harald H H GöringSouth Texas Diabetes and Obesity Institute, The University of Texas Rio Grande Valley, San Antonio and Brownsville, Texas.
Vishwajit L NimgaonkarDepartments of Psychiatry and Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania.
Raquel E GurDepartment of Psychiatry, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania.
Laura AlmasyDepartments of Genetics, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania.
The University of Texas Rio Grande Valley · USUniversity of Pennsylvania · USTexas Biomedical Research Institute · USUniversity of Pittsburgh · US

Funding

NEUROBEHAVIORAL STUDY OF SCHIZOPHRENIAR01MH042191 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI GUR, RAQUEL E · 1987 to 2018
$7.1M
Quantitative Trait Locus Mapping in Human PedigreesR37MH059490 · NIMH · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI BLANGERO, JOHN · 2001 to 2010
$6.8M
A Neurobehavioral Family Study of SchizophreniaR01MH063480 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI NIMGAONKAR, VISHWAJIT LAXMIKANT · 2001 to 2018
$6.1M
A Neurobehavioral Family Study of SchizophreniaR01MH061622 · NIMH · UNIVERSITY OF TEXAS RIO GRANDE VALLEY · PI ALMASY, LAURA A. · 2001 to 2018
$4.9M
Psychiatric research infrastructure for intervention and implementation in India – TEAMSD43TW009114 · FIC · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Smita N Deshpande, Mary Elizabeth Hawk · 2014 to 2026
$3.2M
EXTRAMULAR RESEARCH FACILITIES CONSTRUCTIONC06RR017515 · NCRR · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI SHADE, ROBERT E · 2003 to 2003
$3.1M
QUANTITATIVE TRAIT LOCUS MAPPING IN HUMAN PEDIGREESR01MH059490 · NIMH · SOUTHWEST FOUNDATION FOR BIOMEDICAL RES · PI BLANGERO, JOHN · 1998 to 2000
$426k
NEUROBEHAVIORAL STUDY OF SCHIZOPHRENIAR37MH042191 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI GUR, RAQUEL E · 1990 to 1999
–
FIC NIH HHS D43 TW009114NCRR NIH HHS C06 RR017515NIMH NIH HHS R01 MH042191NIMH NIH HHS R01 MH059490NIMH NIH HHS R01 MH061622NIMH NIH HHS R01 MH063480NIMH NIH HHS R37 MH042191NIMH NIH HHS R37 MH059490
6 · The paper itself

Abstract

Schizophrenia is a serious mental illness, involving disruptions in thought and behavior, with a worldwide prevalence of about one percent. Although highly heritable, much of the genetic liability of schizophrenia is yet to be explained. We searched for susceptibility loci in multiplex, multigenerational families affected by schizophrenia, targeting protein-altering variation with in silico predicted functional effects. Exome sequencing was performed on 136 samples from eight European-American families, including 23 individuals diagnosed with schizophrenia or schizoaffective disorder. In total, 11,878 non-synonymous variants from 6,396 genes were tested for their association with schizophrenia spectrum disorders. Pathway enrichment analyses were conducted on gene-based test results, protein-protein interaction (PPI) networks, and epistatic effects. Using a significance threshold of FDR < 0.1, association was detected for rs10941112 (p = 2.1 × 10

Indexed as

ExomeGenetic MarkersPolymorphism, Single NucleotideAdolescentAdultAgedAged, 80 and overCase-Control StudiesFamilyFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMaleMental Status and Dementia TestsMiddle AgedGenetic Markersexome sequencesschizophreniasynaptic plasticity

Identifiers

PMID28902459
PMCPMC5760172
OpenAlexW2756150824

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.