Evidence map›Paper›PMID 28902189›Full record

ArticleHeredity2017

Admixture on the northern front: population genomics of range expansion in the white-footed mouse (Peromyscus leucopus) and secondary contact with the deer mouse (Peromyscus maniculatus).

A Garcia-Elfring, R D H Barrett, M Combs, T J Davies, J Munshi-South, V Millien

Abstract read
In one paragraph

Article in Heredity, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Three distinct forms of Pneumocystis coexist in individuals of two species of deer mice (genus Peromyscus).Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2025
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  15. Biological collections for understanding biodiversity in the Anthropocene.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

A Garcia-ElfringRedpath Museum, McGill University, Montreal, QC, Canada.
R D H BarrettRedpath Museum, McGill University, Montreal, QC, Canada.
M CombsLouis Calder Center, Biological Field Station, Fordham University, Armonk, NY, USA.
T J DaviesDepartment of Biology, McGill University, Montreal, QC, Canada.
J Munshi-SouthLouis Calder Center, Biological Field Station, Fordham University, Armonk, NY, USA.
V MillienRedpath Museum, McGill University, Montreal, QC, Canada.ORCID 0000-0002-1390-766X

Funding

Adaptive Evolutionary Responses of White-footed Mice (Peromyscus leucopus) to UrbR15GM099055 · NIGMS · FORDHAM UNIVERSITY · PI MUNSHI-SOUTH, JASON · 2012 to 2012
$293k
NIGMS NIH HHS R15 GM099055
6 · The paper itself

Abstract

Range expansion has genetic consequences expected to result in differentiated wave-front populations with low genetic variation and potentially introgression from a local species. The northern expansion of Peromyscus leucopus in southern Quebec provides an opportunity to test these predictions using population genomic tools. Our results show evidence of recent and post-glacial expansion. Genome-wide variation in P. leucopus indicates two post-glacial lineages are separated by the St. Lawrence River, with a more recent divergence of populations isolated by the Richelieu River. In two of three transects we documented northern populations with low diversity in at least one genetic measure, although most relationships were not significant. Consistent with bottlenecks and allele surfing during northward expansion, we document a northern-most population with low nucleotide diversity, divergent allele frequencies and the most private alleles, and observed heterozygosity indicates outcrossing. Ancestry proportions revealed putative hybrids of P. leucopus and P. maniculatus. A formal test for gene flow confirmed secondary contact, showing that a reticulate population phylogeny between P. maniculatus and P. leucopus was a better fit to the data than a bifurcating model without gene flow. Thus, we provide the first genomic evidence of gene flow between this pair of species in natural populations. Understanding the evolutionary consequences of secondary contact is an important conservation concern as climate-induced range expansions are expected to result in new hybrid zones between closely related species.

Indexed as

Genetics, PopulationHybridization, GeneticMetagenomicsAllelesAnimalsGene FlowGene FrequencyGenetic DriftGenetic VariationGenotypeModels, GeneticPeromyscusQuebecSympatry

Identifiers

PMID28902189
PMCPMC5677999

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.