Evidence map›Paper›PMID 28901199›Full record

ReviewCritical reviews in biochemistry and molecular biology2017

New tricks for the glycyl radical enzyme family.

Lindsey R F Backman, Michael A Funk, Christopher D Dawson, Catherine L Drennan

Abstract readReview
In one paragraph

Review in Critical reviews in biochemistry and molecular biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed.

  1. The structural basis of malodorant skatole formation by the glycyl radical enzyme indoleacetate decarboxylase.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  3. Review
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  6. Article
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  14. Structural basis for anaerobic alkane activation by a multisubunit glycyl radical enzyme.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  15. Article
  16. Review
  17. Nitric Oxide Inhibition of Glycyl Radical Enzymes and Their Activases.Journal of the American Chemical Society · 2025
    Article
  18. Review
  19. Article
  20. Review

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Lindsey R F Backmana Department of Chemistry , Massachusetts Institute of Technology , Cambridge , MA , USA.
Michael A Funka Department of Chemistry , Massachusetts Institute of Technology , Cambridge , MA , USA.
Christopher D Dawsonc Department of Biology , Massachusetts Institute of Technology , Cambridge , MA , USA.
Catherine L Drennana Department of Chemistry , Massachusetts Institute of Technology , Cambridge , MA , USA.

Funding

PRE-DOCTORAL TRAINING IN THE BIOLOGICAL SCIENCEST32GM007287 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BELL, STEPHEN P., KEATING, AMY E · 1985 to 2019
$40.8M
Complex Metallocluster Structure and AssemblyR01GM069857 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI DRENNAN, CATHERINE L · 2004 to 2017
$3.1M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM069857NIGMS NIH HHS T32 GM007287
6 · The paper itself

Abstract

Glycyl radical enzymes (GREs) are important biological catalysts in both strict and facultative anaerobes, playing key roles both in the human microbiota and in the environment. GREs contain a backbone glycyl radical that is post-translationally installed, enabling radical-based mechanisms. GREs function in several metabolic pathways including mixed acid fermentation, ribonucleotide reduction and the anaerobic breakdown of the nutrient choline and the pollutant toluene. By generating a substrate-based radical species within the active site, GREs enable C-C, C-O and C-N bond breaking and formation steps that are otherwise challenging for nonradical enzymes. Identification of previously unknown family members from genomic data and the determination of structures of well-characterized GREs have expanded the scope of GRE-catalyzed reactions as well as defined key features that enable radical catalysis. Here, we review the structures and mechanisms of characterized GREs, classifying members into five categories. We consider the open questions about each of the five GRE classes and evaluate the tools available to interrogate uncharacterized GREs.

Indexed as

MicrobiotaAcetyltransferasesAnaerobiosisBacteriaBacterial ProteinsCarboxy-LyasesFermentationHumansLigasesModels, MolecularProtein ConformationRibonucleotide ReductasesSubstrate SpecificitySugar Alcohol DehydrogenasesAcetyltransferasesBacterial ProteinsCarboxy-Lyasesformate C-acetyltransferaseglycerol dehydrogenaseLigasesRibonucleotide ReductasesSugar Alcohol Dehydrogenasesanaerobic metabolismbenzylsuccinate synthasecholine trimethylamine-lyaseclass III ribonucleotide reductaseGlycyl radical enzymespyruvate formate-lyaseradical chemistryradical decarboxylases

Identifiers

PMID28901199
PMCPMC5911432

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.