Evidence map›Paper›PMID 28900789›Full record

ArticleJournal of biomolecular NMR2017

Gradient reconstitution of membrane proteins for solid-state NMR studies.

Denis Lacabanne, Alons Lends, Clément Danis, Britta Kunert, Marie-Laure Fogeron, Vlastimil Jirasko, Claire Chuilon, Lauriane Lecoq, Cédric Orelle, Vincent Chaptal and 4 more

Abstract read
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In one paragraph

Article in Journal of biomolecular NMR, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Myristic Acid Inhibits the Activity of the Bacterial ABC Transporter BmrA.International journal of molecular sciences · 2021
    Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Denis LacabanneMolecular Microbiology and Structural Biochemistry, Labex Ecofect, UMR 5086 CNRS-Université de Lyon, IBCP, 7 passage du Vercors, 69367, Lyon, France.
Alons LendsPhysical Chemistry, ETH Zurich, Vladimir-Prelog-Weg 2, 8093, Zurich, Switzerland.
Clément DanisMolecular Microbiology and Structural Biochemistry, Labex Ecofect, UMR 5086 CNRS-Université de Lyon, IBCP, 7 passage du Vercors, 69367, Lyon, France.
Britta KunertMolecular Microbiology and Structural Biochemistry, Labex Ecofect, UMR 5086 CNRS-Université de Lyon, IBCP, 7 passage du Vercors, 69367, Lyon, France.
Marie-Laure FogeronMolecular Microbiology and Structural Biochemistry, Labex Ecofect, UMR 5086 CNRS-Université de Lyon, IBCP, 7 passage du Vercors, 69367, Lyon, France.
Vlastimil JiraskoPhysical Chemistry, ETH Zurich, Vladimir-Prelog-Weg 2, 8093, Zurich, Switzerland.
Claire ChuilonMolecular Microbiology and Structural Biochemistry, Labex Ecofect, UMR 5086 CNRS-Université de Lyon, IBCP, 7 passage du Vercors, 69367, Lyon, France.
Lauriane LecoqMolecular Microbiology and Structural Biochemistry, Labex Ecofect, UMR 5086 CNRS-Université de Lyon, IBCP, 7 passage du Vercors, 69367, Lyon, France.
Cédric OrelleMolecular Microbiology and Structural Biochemistry, Labex Ecofect, UMR 5086 CNRS-Université de Lyon, IBCP, 7 passage du Vercors, 69367, Lyon, France.
Vincent ChaptalMolecular Microbiology and Structural Biochemistry, Labex Ecofect, UMR 5086 CNRS-Université de Lyon, IBCP, 7 passage du Vercors, 69367, Lyon, France.
Pierre FalsonMolecular Microbiology and Structural Biochemistry, Labex Ecofect, UMR 5086 CNRS-Université de Lyon, IBCP, 7 passage du Vercors, 69367, Lyon, France.
Jean-Michel JaultMolecular Microbiology and Structural Biochemistry, Labex Ecofect, UMR 5086 CNRS-Université de Lyon, IBCP, 7 passage du Vercors, 69367, Lyon, France.
Beat H MeierPhysical Chemistry, ETH Zurich, Vladimir-Prelog-Weg 2, 8093, Zurich, Switzerland. beme@ethz.ch.
Anja BöckmannMolecular Microbiology and Structural Biochemistry, Labex Ecofect, UMR 5086 CNRS-Université de Lyon, IBCP, 7 passage du Vercors, 69367, Lyon, France. a.bockmann@ibcp.fr.ORCID http://orcid.org/0000-0001-8149-7941

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We here adapted the GRecon method used in electron microscopy studies for membrane protein reconstitution to the needs of solid-state NMR sample preparation. We followed in detail the reconstitution of the ABC transporter BmrA by dialysis as a reference, and established optimal reconstitution conditions using the combined sucrose/cyclodextrin/lipid gradient characterizing GRecon. We established conditions under which quantitative reconstitution of active protein at low lipid-to-protein ratios can be obtained, and also how to upscale these conditions in order to produce adequate amounts for NMR. NMR spectra recorded on a sample produced by GRecon showed a highly similar fingerprint as those recorded previously on samples reconstituted by dialysis. GRecon sample preparation presents a gain in time of nearly an order of magnitude for reconstitution, and shall represent a valuable alternative in solid-state NMR membrane protein sample preparation.

Indexed as

Nuclear Magnetic Resonance, BiomolecularBacterial ProteinsLipidsMass SpectrometryMembrane ProteinsMembrane Transport ProteinsBacterial ProteinsBmr protein, Bacillus subtilisLipidsMembrane ProteinsMembrane Transport ProteinsABC-transporterBmrAMembrane proteins reconstitutionSolid-state NMR

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.