Evidence map›Paper›PMID 28900766›Full record

ArticleFunctional & integrative genomics2018

Diversity and distribution of CYP gene family in Bactrian camel.

Surong Hasi, Jirimutu Yao, Siriguleng Yu, Yanan Tian

Open access · hybridAbstract read
In one paragraph

Article in Functional & integrative genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  5. Review of genetic diversity in Bactrian camel (Animal frontiers : the review magazine of animal agriculture · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Surong HasiKey Laboratory of Clinical Diagnosis and Treatment Technology in Animal Disease, Ministry of Agriculture; College of Veterinary Medicine, Inner Mongolia Agricultural University, Hohhot, 010018, China. surong@imau.edu.cn.
Jirimutu YaoCollege of Food Science and Engineering, Inner Mongolia Agricultural University, Hohhot, 010018, China.
Siriguleng YuKey Laboratory of Clinical Diagnosis and Treatment Technology in Animal Disease, Ministry of Agriculture; College of Veterinary Medicine, Inner Mongolia Agricultural University, Hohhot, 010018, China.
Yanan TianDepartment of Veterinary Physiology and Pharmacology, Texas A&M University, College Station, TX, 77843, USA. YTian@cvm.tamu.edu.
Inner Mongolia Agricultural University · CNMinistry of Agriculture · IDTexas A&M University · US

Funding

National Natural Science Foundation of China 31260623National Natural Science Foundation of China 31560710
6 · The paper itself

Abstract

Cytochrome P450 (CYP) enzymes belong to a superfamily of monooxygenases which are phase I enzymes responsible for the first pass metabolism of about 90% of drugs in animals. However, these enzymes are often polymorphic and metabolism of the same drug in different species or different individuals is influenced by genetic and non-genetic factors. Bactrian camels are capable of survival in harsh living environments, being able to consume diets that are often toxic to other mammals and can tolerate extreme water and food deprivation. The aim of this study was to investigate whether the Bactrian camel's special metabolic pathways and unique detoxification capabilities are attributable to particularities of the CYP gene family. The Bactrian camel's whole genome sequencing data were systemically analyzed and annotated, and then, CYP gene family was searched from the whole protein database and compared with CYP gene families of cattle, horse, chicken, and human. The total of 63 CYP gene copies were found in Bactrian camel's whole genome and were classified into 17 families and 38 subfamilies. Among them, 9 multi-gene families were found, and CYP2, CYP3, and CPY4 have 27, 6, and 7 subfamilies, accounting for 43, 10, and 11% in camel CYP gene, respectively. In comparison with cattle, chicken, horse, and human, the distribution of CYP gene subfamilies in camel is different, with more CYP2J and CYP3A copies in the Bactrian camel, which may contribute to the Bactrian camel's specific biological characteristics and metabolic pathways. Comparing to the cow, horse, chicken, and human CYP genes, the distribution of CYP gene subfamilies is distinct in the Bactrian camel. The higher copy number of CYP2J gene and CYP3A gene in Bactrian camel may be the important factors contributing to the distinct biological characteristics and metabolic pathways of Bactrian camels for adaptation to the harsh environments.

Indexed as

Genetic VariationAnimalsCamelusCattleCytochrome P-450 Enzyme SystemGenomeHorsesHumansPhylogenyWhole Genome SequencingCytochrome P-450 Enzyme SystemBactrian camelComparative genomic analysisCYP gene familyMetabolic pathways

Identifiers

PMID28900766
PMCPMC5748438
OpenAlexW2754574259

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.