Evidence map›Paper›PMID 28900024›Full record

ArticlemBio2017

Metabolic Roles of Uncultivated Bacterioplankton Lineages in the Northern Gulf of Mexico "Dead Zone".

J Cameron Thrash, Kiley W Seitz, Brett J Baker, Ben Temperton, Lauren E Gillies, Nancy N Rabalais, Bernard Henrissat, Olivia U Mason

Open access · goldAbstract read
In one paragraph

Article in mBio, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
9.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 107 citations in OpenAlex.

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  12. Microbial biogeography of the eastern Yucatán carbonate aquifer.Applied and environmental microbiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 4 countries.

J Cameron ThrashDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, USA thrashc@lsu.edu acidophile@gmail.com.ORCID 0000-0003-0896-9986
Kiley W SeitzDepartment of Marine Science, Marine Science Institute, University of Texas at Austin, Port Aransas, Texas, USA.
Brett J BakerDepartment of Marine Science, Marine Science Institute, University of Texas at Austin, Port Aransas, Texas, USA thrashc@lsu.edu acidophile@gmail.com.
Ben TempertonSchool of Biosciences, University of Exeter, Exeter, United Kingdom.
Lauren E GilliesDepartment of Earth, Ocean, and Atmospheric Science, Florida State University, Tallahassee, Florida, USA.
Nancy N RabalaisDepartment of Oceanography and Coastal Sciences, Louisiana State University, Baton Rouge, Louisiana, USA.
Bernard HenrissatArchitecture et Fonction des Macromolécules Biologiques, CNRS, Aix-Marseille Université, 13288 Marseille, France.
Olivia U MasonDepartment of Earth, Ocean, and Atmospheric Science, Florida State University, Tallahassee, Florida, USA.
Florida State University · USLouisiana State University · USThe University of Texas at Austin · USCentre National de la Recherche Scientifique · FRUniversity of Exeter · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Marine regions that have seasonal to long-term low dissolved oxygen (DO) concentrations, sometimes called "dead zones," are increasing in number and severity around the globe with deleterious effects on ecology and economics. One of the largest of these coastal dead zones occurs on the continental shelf of the northern Gulf of Mexico (nGOM), which results from eutrophication-enhanced bacterioplankton respiration and strong seasonal stratification. Previous research in this dead zone revealed the presence of multiple cosmopolitan bacterioplankton lineages that have eluded cultivation, and thus their metabolic roles in this ecosystem remain unknown. We used a coupled shotgun metagenomic and metatranscriptomic approach to determine the metabolic potential of Marine Group II

Indexed as

AnaerobiosisBacteriaCarbonEukaryotaEuryarchaeotaEutrophicationGulf of AmericaMetagenomicsNitratesOxygenPlanktonSeawaterCarbonNitratesOxygencandidate phylahypoxiametagenomicsmicrobial ecologymicrobial metabolism

Identifiers

PMID28900024
PMCPMC5596340
OpenAlexW2951237794

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.