Evidence map›Paper›PMID 28900009›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

On the origin of shape fluctuations of the cell nucleus.

Fang-Yi Chu, Shannon C Haley, Alexandra Zidovska

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 130 citations in OpenAlex.

  1. Review
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  7. Material-Induced Nuclear Deformation Controls Chromatin Architecture in Adipose Stem Cells.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  14. Quantifying Nuclear Shape Fluctuations During Early Mitosis.Methods in molecular biology (Clifton, N.J.) · 2025
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  15. Review
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  18. Curvature fluctuations of fluid vesicles reveal hydrodynamic dissipation within the bilayer.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  19. Article
  20. Review

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Fang-Yi ChuCenter for Soft Matter Research, Department of Physics, New York University, New York, NY 10003.
Shannon C HaleyCenter for Soft Matter Research, Department of Physics, New York University, New York, NY 10003.
Alexandra ZidovskaCenter for Soft Matter Research, Department of Physics, New York University, New York, NY 10003 alexandra.zidovska@nyu.edu.ORCID 0000-0002-4619-4424
New York University · US

Funding

Mechanism and Function of Chromatin Positional Dynamics in InterphaseR00GM104152 · NIGMS · NEW YORK UNIVERSITY · PI ZIDOVSKA, ALEXANDRA · 2014 to 2016
$747k
NIGMS NIH HHS R00 GM104152
6 · The paper itself

Abstract

The nuclear envelope (NE) presents a physical boundary between the cytoplasm and the nucleoplasm, sandwiched in between two highly active systems inside the cell: cytoskeleton and chromatin. NE defines the shape and size of the cell nucleus, which increases during the cell cycle, accommodating for chromosome decondensation followed by genome duplication. In this work, we study nuclear shape fluctuations at short time scales of seconds in human cells. Using spinning disk confocal microscopy, we observe fast fluctuations of the NE, visualized by fluorescently labeled lamin A, and of the chromatin globule surface (CGS) underneath the NE, visualized by fluorescently labeled histone H2B. Our findings reveal that fluctuation amplitudes of both CGS and NE monotonously decrease during the cell cycle, serving as a reliable cell cycle stage indicator. Remarkably, we find that, while CGS and NE typically fluctuate in phase, they do exhibit localized regions of out-of-phase motion, which lead to separation of NE and CGS. To explore the mechanism behind these shape fluctuations, we use biochemical perturbations. We find the shape fluctuations of CGS and NE to be both thermally and actively driven, the latter caused by forces from chromatin and cytoskeleton. Such undulations might affect gene regulation as well as contribute to the anomalously high rates of nuclear transport by, e.g., stirring of molecules next to NE, or increasing flux of molecules through the nuclear pores.

Indexed as

Active Transport, Cell NucleusCell CycleCell LineCell NucleusCell ShapeChromatinCytoskeletonHeLa CellsHumansLamin Type ANuclear EnvelopeNuclear PoreChromatinLamin Type Aactive materialschromatinnuclear envelopenuclear lamina

Identifiers

PMID28900009
PMCPMC5625896
OpenAlexW2755023008

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.