Evidence map›Paper›PMID 28898055›Full record

ArticleACS nano2017

A Carbon Nanotube Optical Reporter Maps Endolysosomal Lipid Flux.

Prakrit V Jena, Daniel Roxbury, Thomas V Galassi, Leila Akkari, Christopher P Horoszko, David B Iaea, Januka Budhathoki-Uprety, Nina Pipalia, Abigail S Haka, Jackson D Harvey and 4 more

Open access · greenAbstract read
In one paragraph

Article in ACS nano, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 124 citations in OpenAlex.

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  8. Near-Infrared Fluorescent Single-Walled Carbon Nanotubes for Biosensing.Small (Weinheim an der Bergstrasse, Germany) · 2025
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  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Prakrit V JenaMemorial Sloan Kettering Cancer Center , New York, New York 10065, United States.ORCID 0000-0001-5493-3058
Daniel RoxburyDepartment of Chemical Engineering, University of Rhode Island , Kingston, Rhode Island 02881, United States.ORCID 0000-0003-2812-3523
Thomas V GalassiMemorial Sloan Kettering Cancer Center , New York, New York 10065, United States.ORCID 0000-0001-8804-8524
Leila AkkariMemorial Sloan Kettering Cancer Center , New York, New York 10065, United States.
Christopher P HoroszkoMemorial Sloan Kettering Cancer Center , New York, New York 10065, United States.ORCID 0000-0003-2344-4707
David B IaeaWeill Cornell Medicine , New York, New York 10065, United States.
Januka Budhathoki-UpretyMemorial Sloan Kettering Cancer Center , New York, New York 10065, United States.ORCID 0000-0003-3395-4823
Nina PipaliaWeill Cornell Medicine , New York, New York 10065, United States.
Abigail S HakaWeill Cornell Medicine , New York, New York 10065, United States.
Jackson D HarveyMemorial Sloan Kettering Cancer Center , New York, New York 10065, United States.ORCID 0000-0001-8700-0713
Jeetain MittalDepartment of Chemical and Biomolecular Engineering, Lehigh University , Bethlehem, Pennsylvania 18015, United States.
Frederick R MaxfieldWeill Cornell Medicine , New York, New York 10065, United States.
Johanna A JoyceMemorial Sloan Kettering Cancer Center , New York, New York 10065, United States.
Daniel A HellerMemorial Sloan Kettering Cancer Center , New York, New York 10065, United States.ORCID 0000-0002-6866-0000
Memorial Sloan Kettering Cancer Center · USCornell University · USLehigh University · USUniversity of Rhode Island · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Training CoreP20GM103430 · NIGMS · UNIVERSITY OF RHODE ISLAND · PI Ang Cai · 2012 to 2026
$63.6M
Variability of Cellular Responses to Growth Factors and Drugs During TumorgenesisU54CA148967 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI ALTAN-BONNET, GREGOIRE · 2010 to 2014
$13.8M
CANCER PHARMACOLOGYT32CA062948 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI LORRAINE J GUDAS · 1994 to 2026
$12.1M
Macrophage-Lipoprotein InteractionsR01HL093324 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI MAXFIELD, FREDERICK R. · 2009 to 2025
$6.7M
Transient Metabolite Detection for Single-Cell Metabolomics and DiagnosticsDP2HD075698 · NICHD · SLOAN-KETTERING INST CAN RESEARCH · PI HELLER, DANIEL ALAN · 2012 to 2012
$2.7M
Investigating and Targeting TAMs in the Glioma MicroenvironmentR01CA181355 · NCI · UNIVERSITY OF LAUSANNE · PI JOYCE, JOHANNA · 2014 to 2018
$1.4M
Structure-function studies of the sterol transport protein, STARD4.F31DK104631 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI IAEA, DAVID BURTON · 2015 to 2016
$69k
NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA181355NCI NIH HHS T32 CA062948NCI NIH HHS U54 CA148967NHLBI NIH HHS R01 HL093324NICHD NIH HHS DP2 HD075698NIDDK NIH HHS F31 DK104631NIGMS NIH HHS P20 GM103430
6 · The paper itself

Abstract

Lipid accumulation within the lumen of endolysosomal vesicles is observed in various pathologies including atherosclerosis, liver disease, neurological disorders, lysosomal storage disorders, and cancer. Current methods cannot measure lipid flux specifically within the lysosomal lumen of live cells. We developed an optical reporter, composed of a photoluminescent carbon nanotube of a single chirality, that responds to lipid accumulation via modulation of the nanotube's optical band gap. The engineered nanomaterial, composed of short, single-stranded DNA and a single nanotube chirality, localizes exclusively to the lumen of endolysosomal organelles without adversely affecting cell viability or proliferation or organelle morphology, integrity, or function. The emission wavelength of the reporter can be spatially resolved from within the endolysosomal lumen to generate quantitative maps of lipid content in live cells. Endolysosomal lipid accumulation in cell lines, an example of drug-induced phospholipidosis, was observed for multiple drugs in macrophages, and measurements of patient-derived Niemann-Pick type C fibroblasts identified lipid accumulation and phenotypic reversal of this lysosomal storage disease. Single-cell measurements using the reporter discerned subcellular differences in equilibrium lipid content, illuminating significant intracellular heterogeneity among endolysosomal organelles of differentiating bone-marrow-derived monocytes. Single-cell kinetics of lipoprotein-derived cholesterol accumulation within macrophages revealed rates that differed among cells by an order of magnitude. This carbon nanotube optical reporter of endolysosomal lipid content in live cells confers additional capabilities for drug development processes and the investigation of lipid-linked diseases.

Indexed as

AtherosclerosisDNA, Single-StrandedEndosomesHumansLipidsLuminescent MeasurementsLysosomesMacrophagesMonocytesNanotubes, CarbonNiemann-Pick Disease, Type COptics and PhotonicsSingle-Cell AnalysisTransport VesiclesDNA, Single-StrandedLipidsNanotubes, Carbonhyperspectral microscopylive-cell imagingnear-infrared fluorescencesingle-cell sensingsingle-walled carbon nanotubes

Identifiers

PMID28898055
PMCPMC5707631
OpenAlexW2952318715

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.