Evidence map›Paper›PMID 28894257›Full record

ArticleScientific reports2017

Stress Granules Contain Rbfox2 with Cell Cycle-related mRNAs.

Chungoo Park, Sunkyung Choi, Yong-Eun Kim, Siyeo Lee, Su-Hyung Park, Robert S Adelstein, Sachiyo Kawamoto, Kee K Kim

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 49 citations in OpenAlex.

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  19. Stress Granules in Cancer.Reviews of physiology, biochemistry and pharmacology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Chungoo ParkSchool of Biological Sciences and Technology, Chonnam National University, Gwangju, 61186, Republic of Korea.ORCID 0000-0002-9545-6654
Sunkyung ChoiDepartment of Biochemistry, Chungnam National University, Daejeon, 34134, Republic of Korea.
Yong-Eun KimDepartment of Biochemistry, Chungnam National University, Daejeon, 34134, Republic of Korea.
Siyeo LeeDepartment of Biochemistry, Chungnam National University, Daejeon, 34134, Republic of Korea.
Su-Hyung ParkGraduate School of Medical Science and Engineering, KAIST, Daejeon, 34141, Republic of Korea.
Robert S AdelsteinLaboratory of Molecular Cardiology, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, MD, 20892, USA.
Sachiyo KawamotoLaboratory of Molecular Cardiology, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, MD, 20892, USA. kawamots@nhlbi.nih.gov.
Kee K KimDepartment of Biochemistry, Chungnam National University, Daejeon, 34134, Republic of Korea. kimkk@cnu.ac.kr.
Chungnam National University · KRNational Institutes of Health · USChonnam National University · KRKorea Advanced Institute of Science and Technology · KR

Funding

Alternative Splicing of Nonmuscle Myosin Heavy ChainsZ01HL004236 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI ADELSTEIN, ROBERT · 2004 to 2008
$826k
Intramural NIH HHS Z01 HL004236
6 · The paper itself

Abstract

Rbfox RNA-binding proteins play important roles in the regulation of alternative pre-mRNA splicing, but their role in other gene regulatory mechanisms is not well understood. Here, we show that Rbfox2 is a novel constituent of cytoplasmic stress granules, the translational silencing machinery assembled in response to cellular stress. We also show that the RNA binding activity of the Rbfox family protein is crucial for its localization into stress granules. To investigate the role of Rbfox2 in stress granules we used RNA-immunoprecipitation sequencing to identify cytoplasmic transcriptome-wide targets of Rbfox2. We report that a subset of cell cycle-related genes including retinoblastoma 1 is the target of Rbfox2 in cytoplasmic stress granules, and Rbfox2 regulates the retinoblastoma 1 mRNA and protein expression levels during and following stress exposure. Our study proposes a novel function for Rbfox2 in cytoplasmic stress granules.

Indexed as

Cell CycleCytoplasmic GranulesGene Expression ProfilingHeLa CellsHumansImmunoprecipitationProtein BindingRepressor ProteinsRetinoblastoma Binding ProteinsRNA, MessengerRNA Splicing FactorsSequence Analysis, RNAUbiquitin-Protein LigasesRB1 protein, humanRBFOX2 protein, humanRepressor ProteinsRetinoblastoma Binding ProteinsRNA, MessengerRNA Splicing FactorsUbiquitin-Protein Ligases

Identifiers

PMID28894257
PMCPMC5593835
OpenAlexW2751991639

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.