Evidence map›Paper›PMID 28894005›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Varicose and cheerio collaborate with pebble to mediate semaphorin-1a reverse signaling in

Sangyun Jeong, Da-Som Yang, Young Gi Hong, Sarah P Mitchell, Matthew P Brown, Alex L Kolodkin

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.6field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

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  8. Transcriptional Correlates of Chronic Alcohol Neuroadaptation inFrontiers in behavioral neuroscience · 2021
    Article
  9. Review
  10. Identification ofMolecules and cells · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Sangyun JeongDepartment of Molecular Biology, Chonbuk National University, Jeonju, Jeollabukdo 54896, Republic of Korea; sjeong4@jbnu.ac.kr kolodkin@jhmi.edu.
Da-Som YangDepartment of Molecular Biology, Chonbuk National University, Jeonju, Jeollabukdo 54896, Republic of Korea.
Young Gi HongDepartment of Molecular Biology, Chonbuk National University, Jeonju, Jeollabukdo 54896, Republic of Korea.
Sarah P MitchellSolomon H. Snyder Department of Neuroscience, The Johns Hopkins University School of Medicine, Baltimore, MD 21205.
Matthew P BrownSolomon H. Snyder Department of Neuroscience, The Johns Hopkins University School of Medicine, Baltimore, MD 21205.
Alex L KolodkinSolomon H. Snyder Department of Neuroscience, The Johns Hopkins University School of Medicine, Baltimore, MD 21205; sjeong4@jbnu.ac.kr kolodkin@jhmi.edu.
Jeonbuk National University · KRHoward Hughes Medical Institute · USJohns Hopkins Medicine · US

Funding

SEMAPHORIN-MEDIATED NEURONAL GROWTH CONE GUIDANCER01NS035165 · NINDS · JOHNS HOPKINS UNIVERSITY · PI KOLODKIN, ALEX L · 1996 to 2004
$1.7M
Howard Hughes Medical InstituteNINDS NIH HHS R01 NS035165
6 · The paper itself

Abstract

The transmembrane semaphorin Sema-1a acts as both a ligand and a receptor to regulate axon-axon repulsion during neural development. Pebble (Pbl), a Rho guanine nucleotide exchange factor, mediates Sema-1a reverse signaling through association with the N-terminal region of the Sema-1a intracellular domain (ICD), resulting in cytoskeletal reorganization. Here, we uncover two additional Sema-1a interacting proteins, varicose (Vari) and cheerio (Cher), each with neuronal functions required for motor axon pathfinding. Vari is a member of the membrane-associated guanylate kinase (MAGUK) family of proteins, members of which can serve as scaffolds to organize signaling complexes. Cher is related to actin filament cross-linking proteins that regulate actin cytoskeleton dynamics. The PDZ domain binding motif found in the most C-terminal region of the Sema-1a ICD is necessary for interaction with Vari, but not Cher, indicative of distinct binding modalities. Pbl/Sema-1a-mediated repulsive guidance is potentiated by both

Indexed as

Amino Acid MotifsAnimalsCytoskeletonDrosophila melanogasterDrosophila ProteinsFilaminsGuanine Nucleotide Exchange FactorsGuanylate CyclaseMembrane ProteinsProtein DomainsSemaphorinsSignal Transductioncher protein, DrosophilaDrosophila ProteinsFilaminsGuanine Nucleotide Exchange FactorsGuanylate CyclaseMembrane ProteinsPbl protein, Drosophilasemaphorin 1a, DrosophilaSemaphorinsVari protein, Drosophilacheeriopebblereverse signalingsemaphorin-1avaricose

Identifiers

PMID28894005
PMCPMC5625934
OpenAlexW2756276436

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.