Evidence map›Paper›PMID 28893987›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Acidophilic green algal genome provides insights into adaptation to an acidic environment.

Shunsuke Hirooka, Yuu Hirose, Yu Kanesaki, Sumio Higuchi, Takayuki Fujiwara, Ryo Onuma, Atsuko Era, Ryudo Ohbayashi, Akihiro Uzuka, Hisayoshi Nozaki and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 129 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 1 country.

Shunsuke HirookaDepartment of Cell Genetics, National Institute of Genetics, Shizuoka 411-8540, Japan; shirooka@nig.ac.jp smiyagis@nig.ac.jp.
Yuu HiroseDepartment of Environmental and Life Sciences, Toyohashi University of Technology, Aichi 441-8580, Japan.
Yu KanesakiCore Research for Evolutional Science and Technology, Japan Science and Technology Agency, Saitama 332-0012, Japan.
Sumio HiguchiResearch Group for Aquatic Plants Restoration in Lake Nojiri, Nojiriko Museum, Nagano 389-1303, Japan.
Takayuki FujiwaraDepartment of Cell Genetics, National Institute of Genetics, Shizuoka 411-8540, Japan.
Ryo OnumaDepartment of Cell Genetics, National Institute of Genetics, Shizuoka 411-8540, Japan.
Atsuko EraDepartment of Cell Genetics, National Institute of Genetics, Shizuoka 411-8540, Japan.
Ryudo OhbayashiDepartment of Cell Genetics, National Institute of Genetics, Shizuoka 411-8540, Japan.
Akihiro UzukaDepartment of Cell Genetics, National Institute of Genetics, Shizuoka 411-8540, Japan.
Hisayoshi NozakiDepartment of Biological Sciences, Graduate School of Science, University of Tokyo, Tokyo 113-0033, Japan.
Hirofumi YoshikawaCore Research for Evolutional Science and Technology, Japan Science and Technology Agency, Saitama 332-0012, Japan.
Shin-Ya MiyagishimaDepartment of Cell Genetics, National Institute of Genetics, Shizuoka 411-8540, Japan; shirooka@nig.ac.jp smiyagis@nig.ac.jp.
Japan Science and Technology Agency · JPNational Institute of Genetics · JPNojiri Naumanni Museum · JPThe Graduate University for Advanced Studies, SOKENDAI · JPTokyo University of Agriculture · JPToyohashi University of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Some microalgae are adapted to extremely acidic environments in which toxic metals are present at high levels. However, little is known about how acidophilic algae evolved from their respective neutrophilic ancestors by adapting to particular acidic environments. To gain insights into this issue, we determined the draft genome sequence of the acidophilic green alga

Indexed as

Genome, PlantAdaptation, PhysiologicalChlamydomonas reinhardtiiHydrogen-Ion ConcentrationPlant ProteinsPlant Proteinsacidic environmentacidophilic algacomparative genomicscomparative transcriptomicsenvironmental adaptation

Identifiers

PMID28893987
PMCPMC5625915
OpenAlexW2755070497

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.