Evidence map›Paper›PMID 28892058›Full record

ArticleNature neuroscience2017

Glia-specific enhancers and chromatin structure regulate NFIA expression and glioma tumorigenesis.

Stacey M Glasgow, Jeffrey C Carlson, Wenyi Zhu, Lesley S Chaboub, Peng Kang, Hyun Kyoung Lee, Yoanne M Clovis, Brittney E Lozzi, Robert J McEvilly, Michael G Rosenfeld and 4 more

Abstract read
In one paragraph

Article in Nature neuroscience, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 58 citations in OpenAlex.

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  14. A fetal oncogene NUAK2 is an emerging therapeutic target in glioblastoma.bioRxiv : the preprint server for biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Stacey M GlasgowCenter for Cell and Gene Therapy, Baylor College of Medicine, Houston, Texas, USA.
Jeffrey C CarlsonCenter for Cell and Gene Therapy, Baylor College of Medicine, Houston, Texas, USA.
Wenyi ZhuCenter for Cell and Gene Therapy, Baylor College of Medicine, Houston, Texas, USA.
Lesley S ChaboubCenter for Cell and Gene Therapy, Baylor College of Medicine, Houston, Texas, USA.
Peng KangCenter for Cell and Gene Therapy, Baylor College of Medicine, Houston, Texas, USA.
Hyun Kyoung LeeNeurological Research Institute at Texas Children's Hospital, Houston, Texas, USA.
Yoanne M ClovisDepartment of Pediatrics, Pediatric Neuroscience Research Program, Papé Family Pediatric Research Institute, Portland, Oregon, USA.
Brittney E LozziCenter for Cell and Gene Therapy, Baylor College of Medicine, Houston, Texas, USA.
Robert J McEvillySchool of Medicine/HHMI, University of California San Diego, San Diego, California, USA.
Michael G RosenfeldSchool of Medicine/HHMI, University of California San Diego, San Diego, California, USA.
Chad J CreightonDan L Duncan Cancer Center, Division of Biostatistics, Houston, Texas, USA.
Soo-Kyung LeeDepartment of Pediatrics, Pediatric Neuroscience Research Program, Papé Family Pediatric Research Institute, Portland, Oregon, USA.
Carrie A MohilaDepartment of Pathology, Texas Children's Hospital, Houston, Texas, USA.
Benjamin DeneenCenter for Cell and Gene Therapy, Baylor College of Medicine, Houston, Texas, USA.ORCID http://orcid.org/0000-0002-6335-1081
Baylor College of Medicine · USOregon Health & Science University · USUniversity of California San Diego · USNeurological Research Institute · USTexas Children's Hospital · USThe University of Texas MD Anderson Cancer Center · US

Funding

Training In Cell and Gene TherapyT32HL092332 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI MALCOLM K. BRENNER, Bruno Di Stefano · 2008 to 2026
$6.9M
Transcriptional regulation of gliogenesis in the CNSR01NS071153 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI DENEEN, BENJAMIN · 2010 to 2022
$5.0M
The Sox9/NFIA Transcriptional Network In Malignant GliomaK01CA190235 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GLASGOW, STACEY MARIE · 2015 to 2019
$702k
NCI NIH HHS K01 CA190235NHLBI NIH HHS T32 HL092332NINDS NIH HHS R01 NS071153
6 · The paper itself

Abstract

Long-range enhancer interactions critically regulate gene expression, yet little is known about how their coordinated activities contribute to CNS development or how this may, in turn, relate to disease states. By examining the regulation of the transcription factor NFIA in the developing spinal cord, we identified long-range enhancers that recapitulate NFIA expression across glial and neuronal lineages in vivo. Complementary genetic studies found that Sox9-Brn2 and Isl1-Lhx3 regulate enhancer activity and NFIA expression in glial and neuronal populations. Chromatin conformation analysis revealed that these enhancers and transcription factors form distinct architectures within these lineages in the spinal cord. In glioma models, the glia-specific architecture is present in tumors, and these enhancers are required for NFIA expression and contribute to glioma formation. By delineating three-dimensional mechanisms of gene expression regulation, our studies identify lineage-specific chromatin architectures and associated enhancers that regulate cell fate and tumorigenesis in the CNS.

Indexed as

Gene Expression Regulation, NeoplasticAnimalsBase SequenceCarcinogenesisChick EmbryoFemaleGliomaMaleMiceMice, KnockoutMice, TransgenicNeurogliaNFI Transcription FactorsSpinal CordNfia protein, mouseNFI Transcription Factors

Identifiers

PMID28892058
PMCPMC5919190
OpenAlexW2754738019

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.