Evidence map›Paper›PMID 28889947›Full record

ArticleImmunity2017

An NF-κB Transcription-Factor-Dependent Lineage-Specific Transcriptional Program Promotes Regulatory T Cell Identity and Function.

Hyunju Oh, Yenkel Grinberg-Bleyer, Will Liao, Dillon Maloney, Pingzhang Wang, Zikai Wu, Jiguang Wang, Dev M Bhatt, Nicole Heise, Roland M Schmid and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Immunity, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 133 papers.

0numbers the graph read from it
0cells of the map it votes in
133citing papers in PubMed
9.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

133 citing papers in PubMed, 218 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
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  6. Article
  7. Article
  8. NF-κB in inflammation and cancer.Cellular & molecular immunology · 2025
    Review
  9. Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. A critical role of NNature immunology · 2025
    Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review

73 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Hyunju OhDepartment of Microbiology & Immunology, Columbia University College of Physicians & Surgeons, New York, NY 10032, USA.
Yenkel Grinberg-BleyerDepartment of Microbiology & Immunology, Columbia University College of Physicians & Surgeons, New York, NY 10032, USA.
Will LiaoNew York Genome Center, New York, NY 10013, USA.
Dillon MaloneyNew York Genome Center, New York, NY 10013, USA.
Pingzhang WangDepartment of Systems Biology and Department of Biomedical Informatics, Columbia University College of Physicians and Surgeons, New York, NY 10032, USA.
Zikai WuDepartment of Systems Biology and Department of Biomedical Informatics, Columbia University College of Physicians and Surgeons, New York, NY 10032, USA.
Jiguang WangDepartment of Systems Biology and Department of Biomedical Informatics, Columbia University College of Physicians and Surgeons, New York, NY 10032, USA.
Dev M BhattDepartment of Microbiology & Immunology, Columbia University College of Physicians & Surgeons, New York, NY 10032, USA.
Nicole HeiseHerbert Irving Comprehensive Cancer Center, College of Physicians & Surgeons, Columbia University, New York, NY 10032, USA.
Roland M SchmidII Medizinische Klinik, Klinikum Rechts der Isar, Technische Universität Munich, Munich, Germany.
Matthew S HaydenDepartment of Microbiology & Immunology, Columbia University College of Physicians & Surgeons, New York, NY 10032, USA; Section of Dermatology, Department of Surgery, Dartmouth-Hitchcock Medical Center, Lebanon, New Hampshire, 03756, USA.
Ulf KleinDepartment of Microbiology & Immunology, Columbia University College of Physicians & Surgeons, New York, NY 10032, USA; Herbert Irving Comprehensive Cancer Center, College of Physicians & Surgeons, Columbia University, New York, NY 10032, USA; Department of Pathology & Cell Biology, College of Physicians & Surgeons, Columbia University, New York, NY 10032, USA.
Raul RabadanDepartment of Systems Biology and Department of Biomedical Informatics, Columbia University College of Physicians and Surgeons, New York, NY 10032, USA.
Sankar GhoshDepartment of Microbiology & Immunology, Columbia University College of Physicians & Surgeons, New York, NY 10032, USA. Electronic address: sg2715@cumc.columbia.edu.
Columbia University · USNew York Genome Center · USDartmouth–Hitchcock Medical Center · USKlinikum rechts der Isar · DE

Funding

Understanding the role of NF-kB in T-regulatory cell functionR01AI068977 · NIAID · YALE UNIVERSITY · PI GHOSH, SANKAR · 2006 to 2017
$3.9M
Regulation of NF-kB and IkB ProteinsR37AI033443 · NIAID · YALE UNIVERSITY · PI GHOSH, SANKAR · 2001 to 2010
$3.4M
NIAID NIH HHS R01 AI068977NIAID NIH HHS R37 AI033443
6 · The paper itself

Abstract

Both conventional T (Tconv) cells and regulatory T (Treg) cells are activated through ligation of the T cell receptor (TCR) complex, leading to the induction of the transcription factor NF-κB. In Tconv cells, NF-κB regulates expression of genes essential for T cell activation, proliferation, and function. However the role of NF-κB in Treg function remains unclear. We conditionally deleted canonical NF-κB members p65 and c-Rel in developing and mature Treg cells and found they have unique but partially redundant roles. c-Rel was critical for thymic Treg development while p65 was essential for mature Treg identity and maintenance of immune tolerance. Transcriptome and NF-κB p65 binding analyses demonstrated a lineage specific, NF-κB-dependent transcriptional program, enabled by enhanced chromatin accessibility. These dual roles of canonical NF-κB in Tconv and Treg cells highlight the functional plasticity of the NF-κB signaling pathway and underscores the need for more selective strategies to therapeutically target NF-κB.

Indexed as

Transcription, GeneticAnimalsAutoimmunityBinding SitesBiomarkersCell DifferentiationCell LineageCell SurvivalCluster AnalysisCytokinesGene DeletionGene Expression ProfilingGene Expression RegulationHomeostasisImmune ToleranceImmunophenotypingBiomarkersCytokinesNF-kappa BTranscription Factor RelA

Identifiers

PMID28889947
PMCPMC5679261
OpenAlexW2752933178

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.