Evidence map›Paper›PMID 28887542›Full record

ArticleScientific reports2017

Genome-wide analysis of health-related biomarkers in the UK Household Longitudinal Study reveals novel associations.

Bram P Prins, Karoline B Kuchenbaecker, Yanchun Bao, Melissa Smart, Delilah Zabaneh, Ghazaleh Fatemifar, Jian'an Luan, Nick J Wareham, Robert A Scott, John R B Perry and 4 more

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 4 syntheses or guidelines pooled it.

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4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Bram P PrinsWellcome Trust Sanger Institute, Hinxton, UK.
Karoline B KuchenbaeckerWellcome Trust Sanger Institute, Hinxton, UK.
Yanchun BaoInstitute for Social and Economic Research, University of Essex, Wivenhoe Park, Colchester, Essex, UK.
Melissa SmartInstitute for Social and Economic Research, University of Essex, Wivenhoe Park, Colchester, Essex, UK.
Delilah ZabanehMRC Social, Genetic & Developmental Psychiatry Centre, IoPPN, KCL, London, UK.
Ghazaleh FatemifarInstitute for Health Informatics, UCL and the Farr Institute of Health Informatics, London, UK.
Jian'an LuanMRC Epidemiology Unit, University of Cambridge School of Clinical Medicine, Box 285 Institute of Metabolic Science, Cambridge Biomedical Campus, Cambridge, UK.
Nick J WarehamMRC Epidemiology Unit, University of Cambridge School of Clinical Medicine, Box 285 Institute of Metabolic Science, Cambridge Biomedical Campus, Cambridge, UK.
Robert A ScottMRC Epidemiology Unit, University of Cambridge School of Clinical Medicine, Box 285 Institute of Metabolic Science, Cambridge Biomedical Campus, Cambridge, UK.
John R B PerryMRC Epidemiology Unit, University of Cambridge School of Clinical Medicine, Box 285 Institute of Metabolic Science, Cambridge Biomedical Campus, Cambridge, UK.
Claudia LangenbergMRC Epidemiology Unit, University of Cambridge School of Clinical Medicine, Box 285 Institute of Metabolic Science, Cambridge Biomedical Campus, Cambridge, UK.
Michaela BenzevalInstitute for Social and Economic Research, University of Essex, Wivenhoe Park, Colchester, Essex, UK.
Meena KumariInstitute for Social and Economic Research, University of Essex, Wivenhoe Park, Colchester, Essex, UK.
Eleftheria ZegginiWellcome Trust Sanger Institute, Hinxton, UK. eleftheria.zeggini@sanger.ac.uk.ORCID 0000-0003-4238-659X

Funding

HRS Yrs29-34: Y33 SSA CoFundingU01AG009740 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Jessica Faul, KENNETH M LANGA · 1990 to 2026
$555.8M
Creating a National Resource for Genetic Research in Behavioral & Health SciencesRC2AG036495 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WEIR, DAVID R. · 2009 to 2010
$7.4M
Expanding a National Resource for Genetic Research in Behavioral & Health ScienceRC4AG039029 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WEIR, DAVID R. · 2010 to 2010
$6.0M
Medical Research Council MC_U106179471Medical Research Council MC_UU_12015/1Medical Research Council MC_UU_12015/2Medical Research Council MR/N01104X/1Medical Research Council MR/N01104X/2NIA NIH HHS RC2 AG036495NIA NIH HHS RC4 AG039029NIA NIH HHS U01 AG009740Wellcome Trust
6 · The paper itself

Abstract

Serum biomarker levels are associated with the risk of complex diseases. Here, we aimed to gain insights into the genetic architecture of biomarker traits which can reflect health status. We performed genome-wide association analyses for twenty serum biomarkers involved in organ function and reproductive health. 9,961 individuals from the UK Household Longitudinal Study were genotyped using the Illumina HumanCoreExome array and variants imputed to the 1000 Genomes Project and UK10K haplotypes. We establish a polygenic heritability for all biomarkers, confirm associations of fifty-four established loci, and identify five novel, replicating associations at genome-wide significance. A low-frequency variant, rs28929474, (beta = 0.04, P = 2 × 10

Indexed as

Family CharacteristicsFamily HealthGenetic MarkersBiomarkersGenome-Wide Association StudyHealth StatusLongitudinal StudiesReproductive HealthUnited KingdomBiomarkersGenetic Markers

Identifiers

PMID28887542
PMCPMC5591265

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.