Evidence map›Paper›PMID 28887424›Full record

ArticleApplied and environmental microbiology2017

Acyl-Homoserine Lactone Production in Nitrifying Bacteria of the Genera Nitrosospira, Nitrobacter, and Nitrospira Identified via a Survey of Putative Quorum-Sensing Genes.

Brett L Mellbye, Eva Spieck, Peter J Bottomley, Luis A Sayavedra-Soto

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 104 citations in OpenAlex.

  1. Article
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  8. Review
  9. Article
  10. Article
  11. Article
  12. RasI/R Quorum Sensing System Controls the Virulence ofApplied and environmental microbiology · 2022
    Article
  13. Article
  14. Review
  15. Article
  16. Article
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  18. Article
  19. Gene Transfer Agents in Symbiotic Microbes.Results and problems in cell differentiation · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Brett L MellbyeDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, USA mellbyeb@oregonstate.edu sayavedl@oregonstate.edu.
Eva SpieckDepartment of Microbiology and Biotechnology, Biocenter Klein Flottbek, University of Hamburg, Hamburg, Germany.
Peter J BottomleyDepartment of Microbiology, Oregon State University, Corvallis, Oregon, USA.
Luis A Sayavedra-SotoDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, USA mellbyeb@oregonstate.edu sayavedl@oregonstate.edu.
Oregon State University · USUniversität Hamburg · DE

Funding

Reducing Susceptibility to Environmental Stress Throughout the Life SpanP30ES000210 · NIEHS · OREGON STATE UNIVERSITY · PI BECKMAN, JOSEPH S · 1985 to 2015
$21.4M
NIEHS NIH HHS P30 ES000210
6 · The paper itself

Abstract

The genomes of many bacteria that participate in nitrogen cycling through the process of nitrification contain putative genes associated with acyl-homoserine lactone (AHL) quorum sensing (QS). AHL QS or bacterial cell-cell signaling is a method of bacterial communication and gene regulation and may be involved in nitrogen oxide fluxes or other important phenotypes in nitrifying bacteria. Here, we carried out a broad survey of AHL production in nitrifying bacteria in three steps. First, we analyzed the evolutionary history of AHL synthase and AHL receptor homologs in sequenced genomes and metagenomes of nitrifying bacteria to identify AHL synthase homologs in ammonia-oxidizing bacteria (AOB) of the genus

Indexed as

Quorum Sensing4-ButyrolactoneBacterial ProteinsNitrificationNitrobacterNitrosomonadaceaePhylogeny4-ButyrolactoneBacterial Proteinshomoserine lactoneacyl-homoserine lactoneammonia oxidationnitrificationnitrite oxidationNitrobacterNitrosospiraNitrospiraquorum sensing

Identifiers

PMID28887424
PMCPMC5666142
OpenAlexW2752252397

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.