Evidence map›Paper›PMID 28886335›Full record

ArticleMolecular cell2017

Macromolecular Assemblies of the Mammalian Circadian Clock.

Rajindra P Aryal, Pieter Bas Kwak, Alfred G Tamayo, Michael Gebert, Po-Lin Chiu, Thomas Walz, Charles J Weitz

Abstract read
In one paragraph

Article in Molecular cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 162 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
162citing papers in PubMed, 1 pooled it
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

162 citing papers in PubMed, 1 synthesis or guideline pooled it, 263 citations in OpenAlex.

  1. Pooled it
  2. Review
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  7. Review
  8. Article
  9. Gut microbiome-produced bile acid metabolite lengthens the circadian period in host intestinal cells.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  10. Oligomerization of PER2 as a dynamic mode of regulation of the mammalian circadian clock.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  11. Review
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  16. Post-Translational Modifications in Animal Circadian Clocks.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  17. AProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  18. Review
  19. Article
  20. The sleep-wake history contributes to rhythmic BMAL1 chromatin binding in the cerebral cortex but not in the liver.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article

102 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Rajindra P AryalDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Pieter Bas KwakDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Alfred G TamayoDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Michael GebertDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Po-Lin ChiuDepartment of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.
Thomas WalzLaboratory of Molecular Electron Microscopy, Rockefeller University, New York, NY 10065, USA.
Charles J WeitzDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA. Electronic address: cweitz@hms.harvard.edu.
Harvard University · USRockefeller University · US

Funding

TRAINING IN SLEEP, CIRCADIAN &RESPIRATORY NEUROBIOLOGYT32HL007901 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI Charles A Czeisler · 1998 to 2026
$18.5M
FUNDAMENTAL NEUROBIOLOGYT32NS007484 · NINDS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI REGEHR, WADE G · 2000 to 2014
$5.9M
Mammalian circadian clock: genetics of PERIOD complex composition and structure.R01NS095977 · NINDS · HARVARD MEDICAL SCHOOL · PI WEITZ, CHARLES J · 2016 to 2020
$2.9M
NHLBI NIH HHS T32 HL007901NINDS NIH HHS R01 NS095977NINDS NIH HHS T32 NS007484
6 · The paper itself

Abstract

The mammalian circadian clock is built on a feedback loop in which PER and CRY proteins repress their own transcription. We found that in mouse liver nuclei all three PERs, both CRYs, and Casein Kinase-1δ (CK1δ) are present together in an ∼1.9-MDa repressor assembly that quantitatively incorporates its CLOCK-BMAL1 transcription factor target. Prior to incorporation, CLOCK-BMAL1 exists in an ∼750-kDa complex. Single-particle electron microscopy (EM) revealed nuclear PER complexes purified from mouse liver to be quasi-spherical ∼40-nm structures. In the cytoplasm, PERs, CRYs, and CK1δ were distributed into several complexes of ∼0.9-1.1 MDa that appear to constitute an assembly pathway regulated by GAPVD1, a cytoplasmic trafficking factor. Single-particle EM of two purified cytoplasmic PER complexes revealed ∼20-nm and ∼25-nm structures, respectively, characterized by flexibly tethered globular domains. Our results define the macromolecular assemblies comprising the circadian feedback loop and provide an initial structural view of endogenous eukaryotic clock machinery.

Indexed as

Circadian ClocksCircadian RhythmAnimalsARNTL Transcription FactorsCasein Kinase IdeltaCell LineCell NucleusCircadian Rhythm Signaling Peptides and ProteinsCryptochromesFemaleGenotypeMaleMice, 129 StrainMice, Inbred C57BLMice, KnockoutMicroscopy, ElectronARNTL Transcription FactorsBmal1 protein, mouseCasein Kinase IdeltaCircadian Rhythm Signaling Peptides and ProteinsCry1 protein, mouseCry2 protein, mouseCryptochromesMultiprotein ComplexesPer1 protein, mousePer2 protein, mousePer3 protein, mousePeriod Circadian Proteins

Identifiers

PMID28886335
PMCPMC5679067
OpenAlexW2751470221

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.