Evidence map›Paper›PMID 28886120›Full record

ArticlePloS one2017

Chloride intracellular channel proteins respond to heat stress in Caenorhabditis elegans.

Jun Liang, Yakov Shaulov, Cathy Savage-Dunn, Stephane Boissinot, Tasmia Hoque

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Biomolecules · 2023
    Article
  3. Article
  4. Article
  5. A Series of Tubes: TheJournal of developmental biology · 2020
    Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Jun LiangDepartment of Science, Borough of Manhattan Community College / CUNY, New York, New York, United States of America.ORCID http://orcid.org/0000-0001-7004-8200
Yakov ShaulovDepartment of Biology, Queens College, CUNY, Flushing, New York, United States of America.
Cathy Savage-DunnDepartment of Biology, Queens College, CUNY, Flushing, New York, United States of America.
Stephane BoissinotNew York University Abu Dhabi, Saadiyat Island campus, Abu Dhabi, United Arab Emirates.
Tasmia HoqueDepartment of Science, Borough of Manhattan Community College / CUNY, New York, New York, United States of America.
Borough of Manhattan Community College · USQueens College, CUNY · USNew York University Abu Dhabi · AE

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Novel function of chloride intracellular channel protein (CLIC) and TGF-beta signaling in stress response and healthspan in Caenorhabditis elegansR03AG048578 · NIA · BOROUGH OF MANHATTAN COMMUNITY COLLEGE · PI LIANG, JUN · 2015 to 2016
$146k
NIA NIH HHS R03 AG048578NIH HHS P40 OD010440
6 · The paper itself

Abstract

Chloride intracellular channel proteins (CLICs) are multi-functional proteins that are expressed in various cell types and differ in their subcellular location. Two CLIC homologs, EXL-1 (excretory canal abnormal like-1) and EXC-4 (excretory canal abnormal- 4), are encoded in the Caenorhabditis elegans genome, providing an excellent model to study the functional diversification of CLIC proteins. EXC-4 functions in excretory canal formation during normal animal development. However, to date, the physiological function of EXL-1 remains largely unknown. In this study, we demonstrate that EXL-1 responds specifically to heat stress and translocates from the cytoplasm to the nucleus in intestinal cells and body wall muscle cells under heat shock. In contrast, we do not observe EXC-4 nuclear translocation under heat shock. Full protein sequence analysis shows that EXL-1 bears a non-classic nuclear localization signal (NLS) that EXC-4 is lacking. All mammalian CLIC members have a nuclear localization signal, with the exception of CLIC3. Our phylogenetic analysis of the CLIC gene families across various animal species demonstrates that the duplication of CLICs in protostomes and deuterostomes occurred independently and that the NLS was subsequently lost in amniotes and nematodes, suggesting convergent evolution. We also observe that EXL-1 nuclear translocation occurs in a timely ordered manner in the intestine, from posterior to anterior regions. Finally, we find that exl-1 loss of function mutants are more susceptible to heat stress than wild-type animals, demonstrating functional relevance of the nuclear translocation. This research provides the first link between CLICs and environmental heat stress. We propose that C. elegans CLICs evolved to achieve different physiological functions through subcellular localization change and spatial separation in response to external or internal signals.

Indexed as

Heat-Shock ResponseStress, PhysiologicalAmino Acid SequenceAnimalsCaenorhabditis elegansCell NucleusChloride ChannelsIntracellular SpaceNuclear Localization SignalsOxidative StressProtein TransportChloride ChannelsNuclear Localization Signals

Identifiers

PMID28886120
PMCPMC5590911
OpenAlexW2753361537

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.