Evidence map›Paper›PMID 28886043›Full record

ArticlePloS one2017

Haplotype dependent association of rs7927894 (11q13.5) with atopic dermatitis and chronic allergic rhinitis: A study in ECAP cohort.

Joanna Kinga Ponińska, Bolesław Samoliński, Aneta Tomaszewska, Filip Raciborski, Piotr Samel-Kowalik, Artur Walkiewicz, Agnieszka Lipiec, Barbara Piekarska, Edyta Krzych-Fałta, Andrzej Namysłowski and 7 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 2 pooled it
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 2 syntheses or guidelines pooled it, 14 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Joanna Kinga PonińskaDepartment of Medical Biology, Institute of Cardiology, Warsaw, Poland.
Bolesław SamolińskiDepartment of Prevention of Environmental Hazards and Allergology, Medical University of Warsaw, Warsaw, Poland.
Aneta TomaszewskaDepartment of Prevention of Environmental Hazards and Allergology, Medical University of Warsaw, Warsaw, Poland.
Filip RaciborskiDepartment of Prevention of Environmental Hazards and Allergology, Medical University of Warsaw, Warsaw, Poland.
Piotr Samel-KowalikDepartment of Prevention of Environmental Hazards and Allergology, Medical University of Warsaw, Warsaw, Poland.
Artur WalkiewiczDepartment of Prevention of Environmental Hazards and Allergology, Medical University of Warsaw, Warsaw, Poland.
Agnieszka LipiecDepartment of Prevention of Environmental Hazards and Allergology, Medical University of Warsaw, Warsaw, Poland.
Barbara PiekarskaDepartment of Prevention of Environmental Hazards and Allergology, Medical University of Warsaw, Warsaw, Poland.
Edyta Krzych-FałtaDepartment of Prevention of Environmental Hazards and Allergology, Medical University of Warsaw, Warsaw, Poland.
Andrzej NamysłowskiDepartment of Prevention of Environmental Hazards and Allergology, Medical University of Warsaw, Warsaw, Poland.
Grażyna KostrzewaDepartment of Medical Genetics, Medical University of Warsaw, Warsaw, Poland.
Andrzej PawlikDepartment of Physiology, Pomeranian Medical University, Szczecin, Poland.
Monika JasekLaboratory of Immunogenetics, Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Wroclaw, Poland.
Andrzej WiśniewskiLaboratory of Immunogenetics, Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Wroclaw, Poland.
Piotr KuśnierczykLaboratory of Immunogenetics, Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Wroclaw, Poland.
Sławomir MajewskiDepartment of Dermatology and Venereology, Medical University of Warsaw, Warsaw, Poland.
Rafał PłoskiDepartment of Medical Genetics, Medical University of Warsaw, Warsaw, Poland.
Medical University of Warsaw · PLPolish Academy of Sciences · PLInstitute of Cardiology · PLLudwik Hirszfeld Institute of Immunology and Experimental Therapy · PLPomeranian Medical University · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The T allele of rs7927894 (at 11q13.5) was associated with atopic dermatitis and other allergic diseases. Our purpose was to replicate the association with allergic phenotypes and explore the role of rs7927894 in predisposing to persistent allergic rhinitis and atopic asthma. We also wanted to explore if other SNPs at 11q13.5 contributed to effect of rs7927894. We studied patients with atopic dermatitis (N = 270), atopic asthma (N = 486), persistent allergic rhinitis (N = 589) and controls matched for age, sex and region (N = 540, N = 372 and N = 1178, respectively). We found that rs7927894 T was associated with atopic dermatitis (OR = 1.39, CI: 1.12-1.73, P = 0.003) and independently with persistent allergic rhinitis (OR = 1.24, CI:1.07-1.43, P = 0.0043, Pcorrected = 0.013) but not atopic asthma. Analysis of additional tagging SNPs (rs7930763, rs2513517, rs7125552) showed that effect of rs7927894 T was limited to haplotypes encoding G at rs7125552. In conclusion, rs7927894 T is associated not only with atopic dermatitis but also persistent allergic rhinitis. Since these effects are haplotype dependent rs7927894 alone does not account for the association between 11q13.5 and atopic dermatitis/persistent allergic rhinitis.

Indexed as

AllelesChromosomes, Human, Pair 11Genetic Association StudiesGenetic Predisposition to DiseaseHaplotypesAdultAgedCase-Control StudiesChronic DiseaseDermatitis, AtopicFemaleHumansMaleMiddle AgedOdds RatioPolymorphism, Single Nucleotide

Identifiers

PMID28886043
PMCPMC5590850
OpenAlexW2751568963

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.