ArticleThe ISME journal2018
Ecological and genomic profiling of anaerobic methane-oxidizing archaea in a deep granitic environment.
Article in The ISME journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
28 citing papers in PubMed, 77 citations in OpenAlex.
- Archaeal and Bacterial Communities and Their Relations with Hydrochemistry in Gongzhu Co, a Carbon-Poor, Nutrient-Rich Basin Lake of the Qinghai-Xizang Plateau.Current microbiology · 2026Article
- Metagenomic analysis of the biofilm community at the oxic-anoxic interface of a deep-underground saline spring at the Baksan Neutrino Observatory.Microbiology spectrum · 2026Article
- Methanoperedenaceae archaea: a 20-year research journey.Nature communications · 2026Review
- Microbial oxidation significantly reduces methane export from global groundwaters.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
- Crustal faulting drives biological redox cycling in the deep subsurface.Science advances · 2025Article
- Vertical distribution of methanotrophic archaea in an iron-rich groundwater discharge zone.PloS one · 2025Article
- Diverse microbiome functions, limited temporal variation and substantial genomic conservation within sedimentary and granite rock deep underground research laboratories.Environmental microbiome · 2024Article
- Biofilm Formation on Excavation Damaged Zone Fractures in Deep Neogene Sedimentary Rock.Microbial ecology · 2024Article
- Methanotrophic Methanoperedens archaea host diverse and interacting extrachromosomal elements.Nature microbiology · 2024Article
- Hydrogen and dark oxygen drive microbial productivity in diverse groundwater ecosystems.Nature communications · 2023Article
- Anaerobic methane-oxidizing activity in a deep underground borehole dominantly colonized by Ca. Methanoperedenaceae.Environmental microbiology reports · 2023Article
- Vertically stratified methane, nitrogen and sulphur cycling and coupling mechanisms in mangrove sediment microbiomes.Microbiome · 2023Article
- A widespread group of large plasmids in methanotrophic Methanoperedens archaea.Nature communications · 2022Article
- Active anaerobic methane oxidation and sulfur disproportionation in the deep terrestrial subsurface.The ISME journal · 2022Article
- Depth wide distribution and metabolic potential of chemolithoautotrophic microorganisms reactivated from deep continental granitic crust underneath the Deccan Traps at Koyna, India.Frontiers in microbiology · 2022Article
- The Deep Rocky Biosphere: New Geomicrobiological Insights and Prospects.Frontiers in microbiology · 2021Review
- Groundwater Elusimicrobia are metabolically diverse compared to gut microbiome Elusimicrobia and some have a novel nitrogenase paralog.The ISME journal · 2020Article
- Archaeal transcription.Transcription · 2020Review
- Genomic and enzymatic evidence of acetogenesis by anaerobic methanotrophic archaea.Nature communications · 2020Article
- Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
20 authors at 9 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Recent single-gene-based surveys of deep continental aquifers demonstrated the widespread occurrence of archaea related to Candidatus Methanoperedens nitroreducens (ANME-2d) known to mediate anaerobic oxidation of methane (AOM). However, it is unclear whether ANME-2d mediates AOM in the deep continental biosphere. In this study, we found the dominance of ANME-2d in groundwater enriched in sulfate and methane from a 300-m deep underground borehole in granitic rock. A near-complete genome of one representative species of the ANME-2d obtained from the underground borehole has most of functional genes required for AOM and assimilatory sulfate reduction. The genome of the subsurface ANME-2d is different from those of other members of ANME-2d by lacking functional genes encoding nitrate and nitrite reductases and multiheme cytochromes. In addition, the subsurface ANME-2d genome contains a membrane-bound NiFe hydrogenase gene putatively involved in respiratory H
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.