Evidence map›Paper›PMID 28882824›Full record

ArticleAmerican journal of physiology. Gastrointestinal and liver physiology2017

A physics-based model for maintenance of the pH gradient in the gastric mucus layer.

Owen L Lewis, James P Keener, Aaron L Fogelson

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Gastrointestinal and liver physiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  4. Immune cell changes inAnnals of medicine · 2024
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  9. Review
  10. Article
  11. Article
  12. Review
  13. Physical chemistry of gastric digestion of proteins gels.Current research in food science · 2020
    Article
  14. The Interaction ofInternational journal of molecular sciences · 2019
    Review
  15. Gastroduodenal Injury: Role of Protective Factors.Current gastroenterology reports · 2019
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Owen L LewisDepartment of Mathematics, University of Utah, Salt Lake City, Utah; and olewis@math.utah.edu.
James P KeenerDepartment of Mathematics, University of Utah, Salt Lake City, Utah; and.
Aaron L FogelsonDepartment of Mathematics, University of Utah, Salt Lake City, Utah; and.
University of Utah · US

Funding

Modeling gastric mucus layer physiologyR01GM131408 · NIGMS · UNIVERSITY OF UTAH · PI FOGELSON, AARON L · 2018 to 2021
$1.5M
NIGMS NIH HHS R01 GM131408
6 · The paper itself

Abstract

It is generally accepted that the gastric mucus layer provides a protective barrier between the lumen and the mucosa, shielding the mucosa from acid and digestive enzymes and preventing autodigestion of the stomach epithelium. However, the precise mechanisms that contribute to this protective function are still up for debate. In particular, it is not clear what physical processes are responsible for transporting hydrogen protons, secreted within the gastric pits, across the mucus layer to the lumen without acidifying the environment adjacent to the epithelium. One hypothesis is that hydrogen may be bound to the mucin polymers themselves as they are convected away from the mucosal surface and eventually degraded in the stomach lumen. It is also not clear what mechanisms prevent hydrogen from diffusing back toward the mucosal surface, thereby lowering the local pH. In this work we investigate a physics-based model of ion transport within the mucosal layer based on a Nernst-Planck-like equation. Analysis of this model shows that the mechanism of transporting protons bound to the mucus gel is capable of reproducing the trans-mucus pH gradients reported in the literature. Furthermore, when coupled with ion exchange at the epithelial surface, our analysis shows that bicarbonate secretion alone is capable of neutralizing the epithelial pH, even in the face of enormous diffusive gradients of hydrogen. Maintenance of the pH gradient is found to be robust to a wide array of perturbations in both physiological and phenomenological model parameters, suggesting a robust physiological control mechanism.

Indexed as

Computer SimulationModels, BiologicalAnimalsGastric MucinsGastric MucosaHumansHydrogen-Ion ConcentrationIon ExchangeKineticsMembrane PotentialsMucusNumerical Analysis, Computer-AssistedGastric Mucinsbicarbonate bufferinggastric mucusion exchangemathematical modelpH gradient

Identifiers

PMID28882824
PMCPMC12148342
OpenAlexW2752631056

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.