Evidence map›Paper›PMID 28879196›Full record

ArticleMolecular neuropsychiatry2017

Assessment of Whole-Exome Sequence Data in Attempted Suicide within a Bipolar Disorder Cohort.

Eric T Monson, Mehdi Pirooznia, Jennifer Parla, Melissa Kramer, Fernando S Goes, Marie E Gaine, Sophia C Gaynor, Kelly de Klerk, Dubravka Jancic, Rachel Karchin and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular neuropsychiatry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Genetics and epigenetics of self-injurious thoughts and behaviors: Systematic review of the suicide literature and methodological considerations.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2022
    Pooled it
  2. Article
  3. Review
  4. Review
  5. Review
  6. Rare protein-coding variants implicate genes involved in risk of suicide death.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2021
    Article
  7. Article
  8. Review
  9. Article
  10. A targeted sequencing study of glutamatergic candidate genes in suicide attempters with bipolar disorder.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Eric T MonsonDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa, USA.
Mehdi PiroozniaDepartment of Psychiatry and Behavioral Sciences, Johns Hopkins School of Medicine, Baltimore, Maryland, USA.
Jennifer ParlaStanley Institute for Cognitive Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, USA.
Melissa KramerStanley Institute for Cognitive Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, USA.
Fernando S GoesDepartment of Psychiatry and Behavioral Sciences, Johns Hopkins School of Medicine, Baltimore, Maryland, USA.
Marie E GaineDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa, USA.
Sophia C GaynorDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa, USA.
Kelly de KlerkDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa, USA.
Dubravka JancicDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa, USA.
Rachel KarchinDepartment of Biomedical Engineering, Institute for Computational Medicine, Johns Hopkins University, Maryland, USA.
W Richard McCombieStanley Institute for Cognitive Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, USA.
Peter P ZandiDepartment of Mental Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA.
James B PotashDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa, USA.
Virginia L WillourDepartment of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa, USA.
University of Iowa · USJohns Hopkins University · USCold Spring Harbor Laboratory · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007337 · NIGMS · UNIVERSITY OF IOWA · PI GEYER, PAMELA K., LENTZ, STEVEN R · 1985 to 2020
$15.9M
2/2-Rare Bipolar Loci Identification Through Synaptome Sequencing.R01MH087992 · NIMH · COLD SPRING HARBOR LABORATORY · PI MCCOMBIE, WILLIAM RICHARD · 2010 to 2014
$3.9M
Genetic Risk Factor Suicidal BehaviorR01MH079240 · NIMH · UNIVERSITY OF IOWA · PI WILLOUR, VIRGINIA L · 2007 to 2015
$3.5M
1/2 Rare Bipolar Loci identification through Synaptome SequencingR01MH087979 · NIMH · UNIVERSITY OF IOWA · PI POTASH, JAMES B. · 2010 to 2014
$2.0M
Novel Analytic Methods for Rare Variant Detection in Bipolar DisorderK01MH093809 · NIMH · JOHNS HOPKINS UNIVERSITY · PI PIROOZNIA, MEHDI · 2011 to 2015
$886k
NIGMS NIH HHS T32 GM007337NIMH NIH HHS K01 MH093809NIMH NIH HHS R01 MH079240NIMH NIH HHS R01 MH087979NIMH NIH HHS R01 MH087992
6 · The paper itself

Abstract

Suicidal behavior is a complex and devastating phenotype with a heritable component that has not been fully explained by existing common genetic variant analyses. This study represents the first large-scale DNA sequencing project designed to assess the role of rare functional genetic variation in suicidal behavior risk. To accomplish this, whole-exome sequencing data for ∼19,000 genes were generated for 387 bipolar disorder subjects with a history of suicide attempt and 631 bipolar disorder subjects with no prior suicide attempts. Rare functional variants were assessed in all exome genes as well as pathways hypothesized to contribute to suicidal behavior risk. No result survived conservative Bonferroni correction, though many suggestive findings have arisen that merit additional attention. In addition, nominal support for past associations in genes, such as

Indexed as

Bipolar disorderCase/controlExomePathwaySequencingSuicidal behaviorSuicide

Identifiers

PMID28879196
PMCPMC5582499
OpenAlexW2574693826

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.