Evidence map›Paper›PMID 28878643›Full record

ArticleFrontiers in computational neuroscience2017

Homologous Basal Ganglia Network Models in Physiological and Parkinsonian Conditions.

Jyotika Bahuguna, Tom Tetzlaff, Arvind Kumar, Jeanette Hellgren Kotaleski, Abigail Morrison

Abstract read
In one paragraph

Article in Frontiers in computational neuroscience, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jyotika BahugunaInstitute of Neuroscience and Medicine (INM-6), Institute for Advanced Simulation (IAS-6), JARA Brain Institute I, Jülich Research CenterJülich, Germany.
Tom TetzlaffInstitute of Neuroscience and Medicine (INM-6), Institute for Advanced Simulation (IAS-6), JARA Brain Institute I, Jülich Research CenterJülich, Germany.
Arvind KumarComputational Science and Technology, School of Computer Science and Communication, KTH Royal Institute of TechnologyStockholm, Sweden.
Jeanette Hellgren KotaleskiComputational Science and Technology, School of Computer Science and Communication, KTH Royal Institute of TechnologyStockholm, Sweden.
Abigail MorrisonInstitute of Neuroscience and Medicine (INM-6), Institute for Advanced Simulation (IAS-6), JARA Brain Institute I, Jülich Research CenterJülich, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The classical model of basal ganglia has been refined in recent years with discoveries of subpopulations within a nucleus and previously unknown projections. One such discovery is the presence of subpopulations of arkypallidal and prototypical neurons in external globus pallidus, which was previously considered to be a primarily homogeneous nucleus. Developing a computational model of these multiple interconnected nuclei is challenging, because the strengths of the connections are largely unknown. We therefore use a genetic algorithm to search for the unknown connectivity parameters in a firing rate model. We apply a binary cost function derived from empirical firing rate and phase relationship data for the physiological and Parkinsonian conditions. Our approach generates ensembles of over 1,000 configurations, or homologies, for each condition, with broad distributions for many of the parameter values and overlap between the two conditions. However, the resulting effective weights of connections from or to prototypical and arkypallidal neurons are consistent with the experimental data. We investigate the significance of the weight variability by manipulating the parameters individually and cumulatively, and conclude that the correlation observed between the parameters is necessary for generating the dynamics of the two conditions. We then investigate the response of the networks to a transient cortical stimulus, and demonstrate that networks classified as physiological effectively suppress activity in the internal globus pallidus, and are not susceptible to oscillations, whereas parkinsonian networks show the opposite tendency. Thus, we conclude that the rates and phase relationships observed in the globus pallidus are predictive of experimentally observed higher level dynamical features of the physiological and parkinsonian basal ganglia, and that the multiplicity of solutions generated by our method may well be indicative of a natural diversity in basal ganglia networks. We propose that our approach of generating and analyzing an ensemble of multiple solutions to an underdetermined network model provides greater confidence in its predictions than those derived from a unique solution, and that projecting such homologous networks on a lower dimensional space of sensibly chosen dynamical features gives a better chance than a purely structural analysis at understanding complex pathologies such as Parkinson's disease.

Indexed as

basal gangliadegeneracynetwork modelsoscillationsParkinson's disease

Identifiers

PMID28878643
PMCPMC5572265

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.