ArticleScientific reports2017
RNA Sequencing and Co-expressed Long Non-coding RNA in Modern and Wild Wheats.
Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.
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Who cites it
44 citing papers in PubMed.
- Identifying heat shock-responsive lncRNAs in wheat during grain filling.BMC plant biology · 2026Article
- Unveiling the potential regulatory functions of long non-coding RNAs in potato tuberization through integrated analysis of transcriptomics and phytohormone profiles.BMC plant biology · 2026Article
- Drought stress inFrontiers in plant science · 2026Review
- Transcriptome-wide identification and expression analysis of lncRNAs involved in the nitrate response in wheat.BMC plant biology · 2025Article
- Transcriptomic analysis reveals regulatory mechanisms of LncRNAs and mRNAs in hulless barley in response to cold stress.BMC plant biology · 2025Article
- Plant long noncoding RNAs: why do we not know more?Biological research · 2025Review
- Advanced Biotechnological Interventions in Mitigating Drought Stress in Plants.Plants (Basel, Switzerland) · 2024Review
- Transcriptomic Complexity of Culm Growth and Development in Different Types of Moso Bamboo.International journal of molecular sciences · 2023Review
- Comprehensive investigation of long non-coding RNAs in an endophytic fungus Calcarisporium arbuscula NRRL 3705.Archives of microbiology · 2023Article
- Genome-Wide Analysis of Long Non-Coding RNAs Related to UV-B Radiation in the Antarctic MossInternational journal of molecular sciences · 2023Article
- A Survey of the Transcriptomic Resources in Durum Wheat: Stress Responses, Data Integration and Exploitation.Plants (Basel, Switzerland) · 2023Review
- Review
- Genome-wide analysis of long non-coding RNAs in sugar beet (Frontiers in plant science · 2023Article
- An intersectional analysis of LncRNAs and mRNAs reveals the potential therapeutic targets of Bi Zhong Xiao Decoction in collagen-induced arthritis rats.Chinese medicine · 2022Article
- Article
- Global identification and integrated analysis of heat-responsive long non-coding RNAs in contrasting rice cultivars.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Novel insights into water-deficit-responsive mRNAs and lncRNAs during fiber development in Gossypium hirsutum.BMC plant biology · 2022Article
- Epigenetic regulation of salinity stress responses in cereals.Molecular biology reports · 2022Review
- Non-Coding RNAs in Response to Drought Stress.International journal of molecular sciences · 2021Review
- Identification and characterization of early Fusarium wilt responsive mRNAs and long non-coding RNAs in banana root using high-throughput sequencing.Scientific reports · 2021Article
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3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
There is an urgent need for the improvement of drought-tolerant bread and durum wheat. The huge and complex genome of bread wheat (BBAADD genome) stands as a vital obstruction for understanding the molecular mechanism underlying drought tolerance. However, tetraploid wheat (Triticum turgidum ssp., BBAA genome) is an ancestor of modern bread wheat and offers an important model for studying the drought response due to its less complex genome. Additionally, several wild relatives of tetraploid wheat have already shown a significant drought tolerance. We sequenced root transcriptome of three tetraploid wheat varieties with varying stress tolerance profiles, and built differential expression library of their transcripts under control and drought conditions. More than 5,000 differentially expressed transcripts were identified from each genotype. Functional characterization of transcripts specific to drought-tolerant genotype, revealed their association with osmolytes production and secondary metabolite pathways. Comparative analysis of differentially expressed genes and their non-coding RNA partners, long noncoding RNAs and microRNAs, provided valuable insight to gene expression regulation in response to drought stress. LncRNAs as well as coding transcripts share similar structural features in different tetraploid species; yet, lncRNAs slightly differ from coding transcripts. Several miRNA-lncRNA target pairs were detected as differentially expressed in drought stress. Overall, this study suggested an important pool of transcripts where their manipulations confer a better performance of wheat varieties under drought stress.
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