Evidence map›Paper›PMID 28878254›Full record

ArticleScientific reports2017

Germline Mutations in Cancer Predisposition Genes are Frequent in Sporadic Sarcomas.

Sock Hoai Chan, Weng Khong Lim, Nur Diana Binte Ishak, Shao-Tzu Li, Wei Lin Goh, Gek San Tan, Kiat Hon Lim, Melissa Teo, Cedric Ng Chuan Young, Simeen Malik and 11 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 2 pooled it
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 2 syntheses or guidelines pooled it, 67 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Observational
  4. Article
  5. Article
  6. Article
  7. The Impact of Li-Fraumeni and Germline Retinoblastoma Mutations on Leiomyosarcoma Initiation, Outcomes, and Genetic Testing Recommendations.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. AtypicalFrontiers in oncology · 2023
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Mutagenic Consequences of Sublethal Cell Death Signaling.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 4 institutions in 1 country.

Sock Hoai ChanCancer Genetics Service, Division of Medical Oncology, National Cancer Centre, Singapore, 169610, Singapore.ORCID 0000-0002-9002-350X
Weng Khong LimCentre for Computational Biology, Duke-NUS Medical School, Singapore, 169857, Singapore.
Nur Diana Binte IshakCancer Genetics Service, Division of Medical Oncology, National Cancer Centre, Singapore, 169610, Singapore.
Shao-Tzu LiCancer Genetics Service, Division of Medical Oncology, National Cancer Centre, Singapore, 169610, Singapore.
Wei Lin GohDivision of Medical Oncology, National Cancer Centre, Singapore, 169610, Singapore.
Gek San TanDepartment of Molecular Pathology, Singapore General Hospital, Singapore, 169610, Singapore.
Kiat Hon LimDepartment of Molecular Pathology, Singapore General Hospital, Singapore, 169610, Singapore.
Melissa TeoDivision of Surgical Oncology, National Cancer Centre, Singapore, 169610, Singapore.
Cedric Ng Chuan YoungLaboratory of Cancer Epigenome, Division of Medical Sciences, National Cancer Centre, Singapore, 169610, Singapore.
Simeen MalikSinghealth Duke-NUS Institute of Precision Medicine (PRISM), Singapore, 169856, Singapore.
Mann Hong TanDepartment of Orthopaedic Surgery, Singapore General Hospital, Singapore, 169610, Singapore.
Jonathan Yi Hui TehDivision of Radiation Oncology, National Cancer Centre, Singapore, 169610, Singapore.
Francis Kuok Choon ChinDivision of Radiation Oncology, National Cancer Centre, Singapore, 169610, Singapore.
Sittampalam KesavanDepartment of Anatomical Pathology, Singapore General Hospital, Singapore, 169610, Singapore.
Sathiyamoorthy SelvarajanDepartment of Anatomical Pathology, Singapore General Hospital, Singapore, 169610, Singapore.
Patrick TanSinghealth Duke-NUS Institute of Precision Medicine (PRISM), Singapore, 169856, Singapore.
Bin Tean TehLaboratory of Cancer Epigenome, Division of Medical Sciences, National Cancer Centre, Singapore, 169610, Singapore.
Khee Chee SooDivision of Surgical Oncology, National Cancer Centre, Singapore, 169610, Singapore.
Mohamad FaridDivision of Medical Oncology, National Cancer Centre, Singapore, 169610, Singapore.
Richard QuekDivision of Medical Oncology, National Cancer Centre, Singapore, 169610, Singapore. Richard.quek.h.h@singhealth.com.sg.
Joanne NgeowCancer Genetics Service, Division of Medical Oncology, National Cancer Centre, Singapore, 169610, Singapore. Joanne.Ngeow.Y.Y@singhealth.com.sg.
National Cancer Centre Singapore · SGSingapore General Hospital · SGSingHealth · SGNational University Cancer Institute, Singapore · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Associations of sarcoma with inherited cancer syndromes implicate genetic predisposition in sarcoma development. However, due to the apparently sporadic nature of sarcomas, little attention has been paid to the role genetic susceptibility in sporadic sarcoma. To address this, we performed targeted-genomic sequencing to investigate the prevalence of germline mutations in known cancer-associated genes within an Asian cohort of sporadic sarcoma patients younger than 50 years old. We observed 13.6% (n = 9) amongst 66 patients harbour at least one predicted pathogenic germline mutation in 10 cancer-associated genes including ATM, BRCA2, ERCC4, FANCC, FANCE, FANCI, MSH6, POLE, SDHA and TP53. The most frequently affected genes are involved in the DNA damage repair pathway, with a germline mutation prevalence of 10.6%. Our findings suggests that genetic predisposition plays a larger role than expected in our Asian cohort of sporadic sarcoma, therefore clinicians should be aware of the possibility that young sarcoma patients may be carriers of inherited mutations in cancer genes and should be considered for genetic testing, regardless of family history. The prevalence of germline mutations in DNA damage repair genes imply that therapeutic strategies exploiting the vulnerabilities resulting from impaired DNA repair may be promising areas for translational research.

Indexed as

Genetic Predisposition to DiseaseGerm-Line MutationOncogenesAdolescentAdultBiomarkers, TumorComputational BiologyDNA DamageDNA RepairFemaleHumansMaleMiddle AgedSarcomaSequence Analysis, DNAYoung AdultBiomarkers, Tumor

Identifiers

PMID28878254
PMCPMC5587568
OpenAlexW2751451554

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.