Evidence map›Paper›PMID 28878246›Full record

ArticleScientific reports2017

Loss of NR2E3 represses AHR by LSD1 reprogramming, is associated with poor prognosis in liver cancer.

Tilak Khanal, Kwangmin Choi, Yuet-Kin Leung, Jiang Wang, Dasom Kim, Vinothini Janakiram, Sung-Gook Cho, Alvaro Puga, Shuk-Mei Ho, Kyounghyun Kim

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Targeting Nr2e3 to Modulate Tet2 Expression: Therapeutic Potential for Depression Treatment.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  6. Article
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  8. Review
  9. Review
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  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. BRAFOncogene · 2020
    Article
  17. NR2E3 is a key component in p53 activation by regulating a long noncoding RNA DINO in acute liver injuries.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Tilak KhanalDepartment of Environmental Health, University of Cincinnati, College of Medicine, 160 Panzeca way, Cincinnati, OH, 45267, USA.
Kwangmin ChoiDivision of Experimental Hematology and Cancer Biology, Cincinnati Children's Hospital medical Center, Cincinnati, OH, 45229, USA.
Yuet-Kin LeungDepartment of Environmental Health, University of Cincinnati, College of Medicine, 160 Panzeca way, Cincinnati, OH, 45267, USA.
Jiang WangDepartment of Pathology and Laboratory Medicine, University of Cincinnati, College of Medicine, 231 Albert Sabin Way, Cincinnati, OH, 45267, USA.
Dasom KimDepartment of Environmental Health, University of Cincinnati, College of Medicine, 160 Panzeca way, Cincinnati, OH, 45267, USA.
Vinothini JanakiramDepartment of Environmental Health, University of Cincinnati, College of Medicine, 160 Panzeca way, Cincinnati, OH, 45267, USA.
Sung-Gook ChoDepartment of Biotechnology, Korea National University of Transportation, Chung-ju, South Korea.
Alvaro PugaDepartment of Environmental Health, University of Cincinnati, College of Medicine, 160 Panzeca way, Cincinnati, OH, 45267, USA.ORCID 0000-0002-1318-8909
Shuk-Mei HoDepartment of Environmental Health, University of Cincinnati, College of Medicine, 160 Panzeca way, Cincinnati, OH, 45267, USA.
Kyounghyun KimDepartment of Environmental Health, University of Cincinnati, College of Medicine, 160 Panzeca way, Cincinnati, OH, 45267, USA. kim2ku@uc.edu.
University of Cincinnati Medical Center · USUniversity of Cincinnati · USCincinnati Children's Hospital Medical Center · USCincinnati VA Medical Center · USKorea National University of Transportation · KRSabin Vaccine Institute · US

Funding

REPRODUCTIVE AND DEVELOPMENTAL TOXICOLOGY RESEARCHP30ES006096 · NIEHS · UNIVERSITY OF CINCINNATI · PI PINNEY, SUSAN MENGEL · 1992 to 2022
$35.4M
NIEHS NIH HHS P30 ES006096
6 · The paper itself

Abstract

The aryl hydrocarbon receptor (AHR) plays crucial roles in inflammation, metabolic disorder, and cancer. However, the molecular mechanisms regulating AHR expression remain unknown. Here, we found that an orphan nuclear NR2E3 maintains AHR expression, and forms an active transcriptional complex with transcription factor Sp1 and coactivator GRIP1 in MCF-7 human breast and HepG2 liver cancer cell lines. NR2E3 loss promotes the recruitment of LSD1, a histone demethylase of histone 3 lysine 4 di-methylation (H3K4me2), to the AHR gene promoter region, resulting in repression of AHR expression. AHR expression and responsiveness along with H3K4me2 were significantly reduced in the livers of Nr2e3

Indexed as

Gene Expression Regulation, NeoplasticCell Line, TumorCell Transformation, NeoplasticCellular ReprogrammingComputational BiologyGene Regulatory NetworksHigh-Throughput Nucleotide SequencingHistone DemethylasesHumansKaplan-Meier EstimateLiver NeoplasmsModels, BiologicalOrphan Nuclear ReceptorsPrognosisReceptors, Aryl HydrocarbonHistone DemethylasesKDM1A protein, humanNR2E3 protein, humanOrphan Nuclear ReceptorsReceptors, Aryl Hydrocarbon

Identifiers

PMID28878246
PMCPMC5587550
OpenAlexW2751640823

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.