Evidence map›Paper›PMID 28874665›Full record

ArticleNature communications2017

Endocytic sorting motif interactions involved in Nef-mediated downmodulation of CD4 and CD3.

Santiago Manrique, Daniel Sauter, Florian A Horenkamp, Sebastian Lülf, Hangxing Yu, Dominik Hotter, Kanchan Anand, Frank Kirchhoff, Matthias Geyer

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.2field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
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  11. Structural basis of CD4 downregulation by HIV-1 Nef.Nature structural & molecular biology · 2020
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  12. Article
  13. Loss of Nef-mediated CD3 down-regulation in the HIV-1 lineage increases viral infectivity and spread.Proceedings of the National Academy of Sciences of the United States of America · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Santiago ManriqueInstitute of Innate Immunity, Department of Structural Immunology, University of Bonn, Sigmund-Freud-Str. 25, 53127, Bonn, Germany.
Daniel SauterInstitute of Molecular Virology, Ulm University Medical Center, Meyerhofstr. 1, 89081, Ulm, Germany.
Florian A HorenkampMax Planck-Institute of Molecular Physiology, Department Physical Biochemistry, Otto-Hahn-Str. 11, 44227, Dortmund, Germany.
Sebastian LülfMax Planck-Institute of Molecular Physiology, Department Physical Biochemistry, Otto-Hahn-Str. 11, 44227, Dortmund, Germany.
Hangxing YuInstitute of Molecular Virology, Ulm University Medical Center, Meyerhofstr. 1, 89081, Ulm, Germany.
Dominik HotterInstitute of Molecular Virology, Ulm University Medical Center, Meyerhofstr. 1, 89081, Ulm, Germany.
Kanchan AnandInstitute of Innate Immunity, Department of Structural Immunology, University of Bonn, Sigmund-Freud-Str. 25, 53127, Bonn, Germany.
Frank KirchhoffInstitute of Molecular Virology, Ulm University Medical Center, Meyerhofstr. 1, 89081, Ulm, Germany.
Matthias GeyerInstitute of Innate Immunity, Department of Structural Immunology, University of Bonn, Sigmund-Freud-Str. 25, 53127, Bonn, Germany. matthias.geyer@uni-bonn.de.
Universität Ulm · DECenter of Advanced European Studies and Research · DEMax Planck Institute of Molecular Physiology · DEUniversity of Bonn · DE

Funding

European Research Council
6 · The paper itself

Abstract

Lentiviral Nefs recruit assembly polypeptide complexes and target sorting motifs in cellular receptors to induce their internalization. While Nef-mediated CD4 downmodulation is conserved, the ability to internalize CD3 was lost in HIV-1 and its precursors. Although both functions play key roles in lentiviral replication and pathogenicity, the underlying structural requirements are poorly defined. Here, we determine the structure of SIV

Indexed as

Down-RegulationEndocytosisAmino Acid MotifsCD3 ComplexCD4 AntigensCrystallography, X-RayGene Products, nefHEK293 CellsHIV-1HumansLeukocytes, MononuclearModels, MolecularMutant ProteinsMutationProtein BindingReceptors, Cell SurfaceCD3 ComplexCD4 AntigensGene Products, nefMutant ProteinsReceptors, Cell SurfaceTranscription Factor AP-2

Identifiers

PMID28874665
PMCPMC5585231
OpenAlexW2753671213

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.